BO22128.complete Sequence
3298 bp assembled on 2010-01-25
GenBank Submission: KX799357
> BO22128.complete
GAAGTTATCAGTCGACATGAACATGATGGACAACCGGGCGTTGGCCTACG
TGGCCCACCAGCCCAAGTATGAGACACCGCCGGAAGAAGCGGAGCCGCCC
TGCATGCGCTTTTCGGTTAACCTGTGGAAAAACGAGATGCTGAACTGGGT
GGACCTAATCTGCCTGTTGCCCAATGGATTCCTGCTGGAGCTCAGGGTCA
ATCCGGCCAACACCATCCAGGTAATCAAGGTGGAGATGGTCAACCAGGCC
AAACAGATGCCACTGGGCTATGTGATCAAAGAGGCCTGCGAGTACCAGGT
GTACGGCATCTCGACCTTCAACATCGAACCTTACACCGACGAAACGAAGC
GACTCAGTGAGGTCCAGCCGTACTTCGGCATCCTCAGCCTCGGCGAGCGC
ACCGACACAACGAGCTTTAGCAGCGACTACGAGCTGACCAAGATGGTTAA
CGGAATGATCGGCACCACCTTCGATCATAATCGAACGCACGGCTCGCCCG
AGATTGACGACTTCCGGCTGTATATGACCCAAACTTGCGACAACATCGAA
CTGGAGCGCTCCGCCTACACCTGGCAGCAGAGACTGCTCTACGAGCATCC
TCTGCGACTGGCGAACTCGACTAAAATGCCCGAGCTGATACGGGAGCGGC
ATCCGACCAGAACCTTTCTCATCGTCGTAAAGAACGAGAACGACCAGAGC
ACGTTTACGTTGTCGGTGAACGAGCAGGACACTCCCTTCTCGCTCACGGA
AAGCACGCTGCAGAAGATGAATCGGTCGCAGATGAAAATGAACGACCGGA
CCTCCGACTACATACTCAAAGTGAGCGGTCGCGACGAGTACCTGCTTGGC
GACTATCCCCTGATTCAGTTCCTGTACATCCAAGAGATGCTCTCGGACTC
GGCGGTTCCAAATGTGGTGTTGCAATCAGTTTACCGCCTAGAGTCCTACA
TCAACCACCACAACGAGCAGGCCATGGTAACCAAACGACCGCTGCCGAAG
AAACGGACAGTCCACCTCCACAAGTCGATCTCCTCGCTGTGGGACATGGG
CAACTACTTTCAGTTGACGCTGCACAGCATTTCCAATGTGAACTTTGACA
AGACGCGTGCCCTCAAGGTGGGCGTGCATGTGTGCCTATATCACGGCGAC
AAGAAGTTATGCGCCCAGCGATCAACGGACTCCCCTAACGGCAACTTTGA
CACGTTCCTGTTTAATGACCTGGTGATGGACTTTGACATACAGATGCGCA
ACCTACCGCGGATGACACGCCTCTGCATTGTGATCTTCGAGGTGACCAAG
ATGTCGCGCTCGAAGAAATCGTCCAACAATAAGGACATCGCTCTGAAAGA
CGTCCCGTACAACAAAAACCCGCTGGCCTGGGTCAACACAACAATTTTCG
ACCACAAGGACATCCTGCGCACCGGTCGCCATACGCTGTACACGTGGACG
TATGCTGACGACATTCAGTCGGTTGAGGTTTTCCATCCGCTGGGCACCAT
CGAACCCAATCCGCGCAAAGAGGAATGTGCGCTGGTGGACCTCACATTCC
TCAGCAGCGGAACCGGAACGGTGCGGTATCCCAGCGAGGAGGTCGTGTTG
CAGTACGCTGCGGATCGAGAGCAGGTCAATCGACTGCAACGGCAACTGGC
AGGGCCAGAAAAGCCGATCAAAGAACTGAAGGAGCTGATGGCCAATTATA
CAGGACTGGATAAGATCTATGAGATGGTTGACCAGGACCGCAATGCCATT
TGGGAACGCAGAAACGACATTTTGCGTGAGCTTCCGGAAGAGCTGTCCAT
CTTACTTCACTGCGTCTATTGGAAGGAGCGTGATGACGTAGCGGATATGT
GGTATCTTCTCAAACAGTGGCCGCTTATTTCTATAGAACGCTCCTTGGAG
CTACTGGACTACGCCTATCCAGATCCGGCAGTGAGACGCTTTGCCATCCG
GTGCTTACACTTTCTGAAAGACGAAGACTTGCTCCTGTATCTGCTGCAAT
TGGTACAGGCCATCAAGCACGAATCGTACCTGGAAAGCGATCTGGTAGTG
TTTCTGCTGGAGCGGGCACTGCGCAACCAACGCATCGGCCACTACTTCTT
CTGGCACCTACGCTCTGAGATGCAGACGCCGTCTATGCAAACACGCTTTG
GCCTACTGCTGGAGGTATACCTCAAGGGTTGCAAACATCACGTGGCGCCG
CTGCGGAAGCAGCTTCATGTGCTAGAGAAGCTGAAACAGGGATCTCTGAT
TGCCAAGAAGGGCAGCAAGGAAAAGGTGAAGACCATGCTGCAGGACTTTC
TGCGGGACCAGCGCAACTCGGCTGTCTTTCAGAACATCCAAAATCCACTT
AATCCCAGCTTCCGGTGCAGTGGTGTAACTCCCGATAGGTGCAAGGTAAT
GGATAGCAAGATGCGACCGCTATGGGTGGTATTCGAGAATGCTGACGTCA
ACGCCAGCGATGTGCACATCATTTTCAAAAACGGTGACGATCTCCGCCAG
GACATGCTCACGTTGCAGATGTTGCGTGTGATGGACCAGCTGTGGAAACG
CGATGGTATGGACTTCCGCATGAACATCTACAACTGCATCAGCATGGAGA
AGAGCCTGGGCATGATCGAGGTGGTGCGCCACGCAGAAACCATTGCCAAC
ATACAAAAGGAAAAGGGCATGTTCTCCGCCACGTCGCCGTTCAAGAAGGG
CTCGCTTCTCAGTTGGCTCAAAGAGCACAACAAGCCCGCCGACAAACTGA
ACAAAGCCATCAACGAGTTCACGCTCAGCTGTGCAGGCTACTGCGTGGCC
ACCTATGTGCTTGGCGTAGCTGATCGACACTCGGACAATATAATGGTCAA
GCGAAATGGACAGCTTTTTCACATCGATTTTGGCCACATCCTGGGCCACT
TCAAGGAAAAGCTTGGAGTACGTCGAGAACGAGTGCCCTTTGTCTTGACC
CACGACTTTGTCTACGTAATCAACAAGGGCTTCAATGACCGCGAGTCTAA
AGAGTTTTGTCATTTTCAGGAATTGTGCGAGCGCGCCTTTCTAGTTTTAC
GCAAACACGGCTGCCTTATTCTATCGCTGTTCTCAATGATGATTTCAACG
GGACTGCCAGAACTGTCCTCCGAAAAGGATTTGGACTACCTACGGGAAAC
TTTAGTGCTGGACTACACGGAGGAAAAAGCACGCGAACATTTCCGAGCGA
AATTCAGCGAAGCTTTGGCCAACTCCTGGAAGACTTCCCTTAACTGGGCC
TCGCACAACTTCTCCAAAAACAACAAACAGGCAAGCTTTCTAGACCAT
BO22128.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:09:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pi3K92E-RC | 3267 | CG4141-PC | 1..3264 | 17..3280 | 16305 | 100 | Plus |
| Pi3K92E-RB | 3267 | CG4141-PB | 1..3264 | 17..3280 | 16305 | 100 | Plus |
| Pi3K92E-RA | 3267 | CG4141-PA | 1..3264 | 17..3280 | 16305 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:10:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pi3K92E-RC | 4839 | CG4141-RC | 797..4061 | 16..3280 | 16310 | 100 | Plus |
| Pi3K92E-RB | 4347 | CG4141-RB | 305..3569 | 16..3280 | 16310 | 100 | Plus |
| Pi3K92E-RA | 4420 | CG4141-RA | 378..3642 | 16..3280 | 16310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:09:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20631778..20633523 | 1761..16 | 8715 | 99.9 | Minus |
| 3R | 32079331 | 3R | 20630720..20631307 | 2556..1969 | 2940 | 100 | Minus |
| 3R | 32079331 | 3R | 20630357..20630664 | 2863..2556 | 1540 | 100 | Minus |
| 3R | 32079331 | 3R | 20631509..20631719 | 1968..1758 | 1055 | 100 | Minus |
| 3R | 32079331 | 3R | 20630126..20630300 | 3035..2861 | 875 | 100 | Minus |
| 3R | 32079331 | 3R | 20629750..20629875 | 3280..3155 | 630 | 100 | Minus |
| 3R | 32079331 | 3R | 20629936..20630058 | 3157..3035 | 615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:09:57 has no hits.
BO22128.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:04:37 Download gff for
BO22128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pi3K92E-RB | 282..3545 | 17..3282 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:03 Download gff for
BO22128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pi3K92E-RA | 379..3642 | 17..3282 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:20 Download gff for
BO22128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pi3K92E-RA | 379..3642 | 17..3282 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:20 Download gff for
BO22128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20630357..20630663 | 2557..2863 | 100 | <- | Minus |
| 3R | 20629748..20629875 | 3155..3282 | 98 | <- | Minus |
| 3R | 20629939..20630058 | 3035..3154 | 100 | <- | Minus |
| 3R | 20630127..20630297 | 2864..3034 | 100 | <- | Minus |
| 3R | 20630720..20631307 | 1969..2556 | 100 | <- | Minus |
| 3R | 20631509..20631715 | 1762..1968 | 100 | <- | Minus |
| 3R | 20631778..20633522 | 17..1761 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:03 Download gff for
BO22128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16455470..16455597 | 3155..3282 | 98 | <- | Minus |
| arm_3R | 16455661..16455780 | 3035..3154 | 100 | <- | Minus |
| arm_3R | 16455849..16456019 | 2864..3034 | 100 | <- | Minus |
| arm_3R | 16456079..16456385 | 2557..2863 | 100 | <- | Minus |
| arm_3R | 16456442..16457029 | 1969..2556 | 100 | <- | Minus |
| arm_3R | 16457231..16457437 | 1762..1968 | 100 | <- | Minus |
| arm_3R | 16457500..16459244 | 17..1761 | 99 | | Minus |
BO22128.pep Sequence
Translation from 16 to 3298
> BO22128.pep
MNMMDNRALAYVAHQPKYETPPEEAEPPCMRFSVNLWKNEMLNWVDLICL
LPNGFLLELRVNPANTIQVIKVEMVNQAKQMPLGYVIKEACEYQVYGIST
FNIEPYTDETKRLSEVQPYFGILSLGERTDTTSFSSDYELTKMVNGMIGT
TFDHNRTHGSPEIDDFRLYMTQTCDNIELERSAYTWQQRLLYEHPLRLAN
STKMPELIRERHPTRTFLIVVKNENDQSTFTLSVNEQDTPFSLTESTLQK
MNRSQMKMNDRTSDYILKVSGRDEYLLGDYPLIQFLYIQEMLSDSAVPNV
VLQSVYRLESYINHHNEQAMVTKRPLPKKRTVHLHKSISSLWDMGNYFQL
TLHSISNVNFDKTRALKVGVHVCLYHGDKKLCAQRSTDSPNGNFDTFLFN
DLVMDFDIQMRNLPRMTRLCIVIFEVTKMSRSKKSSNNKDIALKDVPYNK
NPLAWVNTTIFDHKDILRTGRHTLYTWTYADDIQSVEVFHPLGTIEPNPR
KEECALVDLTFLSSGTGTVRYPSEEVVLQYAADREQVNRLQRQLAGPEKP
IKELKELMANYTGLDKIYEMVDQDRNAIWERRNDILRELPEELSILLHCV
YWKERDDVADMWYLLKQWPLISIERSLELLDYAYPDPAVRRFAIRCLHFL
KDEDLLLYLLQLVQAIKHESYLESDLVVFLLERALRNQRIGHYFFWHLRS
EMQTPSMQTRFGLLLEVYLKGCKHHVAPLRKQLHVLEKLKQGSLIAKKGS
KEKVKTMLQDFLRDQRNSAVFQNIQNPLNPSFRCSGVTPDRCKVMDSKMR
PLWVVFENADVNASDVHIIFKNGDDLRQDMLTLQMLRVMDQLWKRDGMDF
RMNIYNCISMEKSLGMIEVVRHAETIANIQKEKGMFSATSPFKKGSLLSW
LKEHNKPADKLNKAINEFTLSCAGYCVATYVLGVADRHSDNIMVKRNGQL
FHIDFGHILGHFKEKLGVRRERVPFVLTHDFVYVINKGFNDRESKEFCHF
QELCERAFLVLRKHGCLILSLFSMMISTGLPELSSEKDLDYLRETLVLDY
TEEKAREHFRAKFSEALANSWKTSLNWASHNFSKNNKQASFLDH
BO22128.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:57:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pi3K92E-PC | 1088 | CG4141-PC | 1..1088 | 1..1088 | 5735 | 100 | Plus |
| Pi3K92E-PB | 1088 | CG4141-PB | 1..1088 | 1..1088 | 5735 | 100 | Plus |
| Pi3K92E-PA | 1088 | CG4141-PA | 1..1088 | 1..1088 | 5735 | 100 | Plus |
| Pi3K68D-PD | 1876 | CG11621-PD | 894..1583 | 386..1084 | 768 | 29.8 | Plus |
| Pi3K68D-PA | 1876 | CG11621-PA | 894..1583 | 386..1084 | 768 | 29.8 | Plus |
