BO22267.complete Sequence
1093 bp assembled on 2009-12-07
GenBank Submission: KX796886
> BO22267.complete
GAAGTTATCAGTCGACATGTCATCCGTCATGCACTACTATCCAGTTCACC
AGGCTAAAGTCGGCTCCTATTCAGCAGATCCTTCCGAGGTTAAATACAGT
GATTTGATCTATGGTCATCATCACGATGTTAACCCCATCGGTCTGCCTCC
CAACTACAACCAGATGAACTCCAACCCCACCACCCTCAACGATCACTGCT
CCCCGCAGCATGTGCATCAGCAGCATGTGTCATCGGACGAGAATCTGCCA
TCTCAGCCCAACCACGACTCGCAGAGGGTGAAGCTTAAGCGATCACGGAC
TGCCTTCACCAGTGTCCAACTGGTGGAACTTGAGAACGAGTTCAAGAGCA
ACATGTACTTGTACAGGACGCGCAGGATTGAGATTGCTCAGCGCTTGTCC
CTGTGCGAACGCCAGGTGAAGATCTGGTTCCAGAACCGACGAATGAAGTT
CAAGAAGGACATACAAGGTCACCGCGAGCCCAAGTCCAACGCCAAGTTGG
CTCAACCCCAGGCTGAGCAGAGTGCCCACCGAGGCATAGTGAAGCGCCTC
ATGTCCTACTCCCAGGATCCCAGGGAGGGCACAGCGGCAGCAGAAAAGCG
TCCTATGATGGCAGTGGCTCCTGTGAATCCAAAGCCAGACTATCAAGCCA
GCCAGAAAATGAAGACCGAAGCATCAACCAACAACGGCATGTGCTCCAGC
GCCGACCTCAGCGAGATCTTGGAGCATCTGGCTCAAACTACAGCTGCACC
ACAGGTCAGCACTGCCACATCTAGCACAGGAACATCTACCAACTCGGCTT
CTAGCTCCTCTTCGGGCCACTATTCCTACAACGTGGATTTGGTTCTGCAG
AGCATCAAGCAGGATTTGGAGGCAGCGGCCCAGGCTTGGTCCAAGTCTAA
ATCCGCGCCTATCCTGGCCACTCAATCCTGGCATCCCAGTTCCCAAAGTC
AGGTCCCCACGAGCGTGCATGCGGCTCCCTCGATGAATCTGTCGTGGGGC
GAGCCTGCTGCCAAGTCGAGAAAGCTGAGCGTTAATCACATGAACCCGTG
CGTAACCTCCTACAATTATCCCAACGCAAGCTTTCTAGACCAT
BO22267.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:07:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
zen-RA | 1062 | CG1046-PA | 1..1059 | 17..1075 | 5280 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:07:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
zen-RA | 1267 | CG1046-RA | 47..1105 | 17..1075 | 5280 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:07:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6753026..6753997 | 1075..104 | 4845 | 99.9 | Minus |
3R | 32079331 | 3R | 6754058..6754148 | 107..17 | 440 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:07:07 has no hits.
BO22267.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:38:42 Download gff for
BO22267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
zen-RB | 16..1074 | 17..1077 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:15:44 Download gff for
BO22267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
zen-RA | 47..1105 | 17..1077 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:13:30 Download gff for
BO22267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
zen-RA | 47..1105 | 17..1077 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:13:30 Download gff for
BO22267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6753024..6753997 | 104..1077 | 99 | <- | Minus |
3R | 6754062..6754148 | 17..103 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:15:44 Download gff for
BO22267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2578746..2579719 | 104..1077 | 99 | <- | Minus |
arm_3R | 2579784..2579870 | 17..103 | 100 | | Minus |
BO22267.pep Sequence
Translation from 16 to 1093
> BO22267.pep
MSSVMHYYPVHQAKVGSYSADPSEVKYSDLIYGHHHDVNPIGLPPNYNQM
NSNPTTLNDHCSPQHVHQQHVSSDENLPSQPNHDSQRVKLKRSRTAFTSV
QLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQ
GHREPKSNAKLAQPQAEQSAHRGIVKRLMSYSQDPREGTAAAEKRPMMAV
APVNPKPDYQASQKMKTEASTNNGMCSSADLSEILEHLAQTTAAPQVSTA
TSSTGTSTNSASSSSSGHYSYNVDLVLQSIKQDLEAAAQAWSKSKSAPIL
ATQSWHPSSQSQVPTSVHAAPSMNLSWGEPAAKSRKLSVNHMNPCVTSYN
YPNASFLDH
BO22267.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:07:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
zen-PA | 353 | CG1046-PA | 1..353 | 1..353 | 1847 | 100 | Plus |
zen2-PB | 232 | CG1048-PB | 10..80 | 75..147 | 230 | 67.1 | Plus |
zen2-PA | 252 | CG1048-PA | 30..100 | 75..147 | 230 | 67.1 | Plus |
exex-PA | 525 | CG8254-PA | 438..517 | 89..168 | 222 | 56.2 | Plus |
ind-PB | 320 | CG11551-PB | 164..293 | 16..158 | 216 | 40.6 | Plus |