BO22304.complete Sequence
406 bp assembled on 2009-12-07
GenBank Submission: KX797908
> BO22304.complete
GAAGTTATCAGTCGACATGGCTCTGCACTCGGCAATCAAGGGAAAACTGA
TCAGCGTTATCGGCGACGAGGACACCTGTGTGGGCTTTCTGCTCGGCGGA
GTGGGCGAGATCAACAAGAATCGCCATCCCAACTTTATGGTGGTCGACAA
AAATACGGCCGTCAGCGAACTGGAGGACTGTTTCAAGCGTTTCCTTAAGC
GGGACGATATCGACATCATTCTAATCAACCAGAACTGCGCCGAGCTTATT
CGTCATGTGATCGATGCCCATACGTCGCCCGTGCCCGCTGTTTTGGAGAT
TCCCTCCAAGGACCATCCGTACGACGCCAGCAAGGACTCCATTCTGCGTC
GCGCCCGCGGCATGTTCAATCCGGAGGATCTGGTGCGCGCAAGCTTTCTA
GACCAT
BO22304.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:52:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vha14-1-RA | 375 | CG8210-PA | 1..372 | 17..388 | 1860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:52:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vha14-1-RA | 659 | CG8210-RA | 98..474 | 12..388 | 1870 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:52:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15679611..15679987 | 388..12 | 1870 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:52:10 has no hits.
BO22304.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:38:26 Download gff for
BO22304.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vha14-RA | 99..470 | 17..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:34:19 Download gff for
BO22304.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vha14-1-RA | 103..474 | 17..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:28:20 Download gff for
BO22304.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vha14-1-RA | 103..474 | 17..390 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:28:20 Download gff for
BO22304.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15679609..15679982 | 17..390 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:34:19 Download gff for
BO22304.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11567114..11567487 | 17..390 | 99 | | Minus |
BO22304.pep Sequence
Translation from 16 to 406
> BO22304.pep
MALHSAIKGKLISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVS
ELEDCFKRFLKRDDIDIILINQNCAELIRHVIDAHTSPVPAVLEIPSKDH
PYDASKDSILRRARGMFNPEDLVRASFLDH
BO22304.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:06:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vha14-1-PA | 124 | CG8210-PA | 1..124 | 1..124 | 644 | 100 | Plus |
Vha14-2-PC | 124 | CG1076-PC | 1..121 | 1..121 | 387 | 57.9 | Plus |
Vha14-2-PB | 124 | CG1076-PB | 1..121 | 1..121 | 387 | 57.9 | Plus |
Vha14-2-PA | 129 | CG1076-PA | 51..126 | 46..121 | 231 | 56.6 | Plus |