BO22305.complete Sequence
484 bp assembled on 2009-12-07
GenBank Submission: KX795860
> BO22305.complete
GAAGTTATCAGTCGACATGGCCAACGTGGAATCTATGATTGTGGAGGAAA
AGACGCAGGTCAAGCAGATTGACCGCGAGAAGACCTGTCCTATGCTGCTC
CGTGTCTTCTGCTCTACGGGACGACACCACTCCGTGTCGGAGTATATGTT
CGGCAACGTGCCCACCAACGAGCTTCAGATTTACACCTGGCAAGACGCCA
CCCTGCACGAACTGACCTCTCTGGTGCGAGACGTCAATCCGGACACCCGG
AAGAAGGGCACCTACTTTGACTTTGCTGTCGTGTACCCCAACTTCCGGAG
TAATCACTTCCAGATGCGCGAAATCGGAGTGACCTGCACGGGTCAAAAAG
GAATCGATGATAATAAGACACTTGCTCAGGCCAAATTCAGCATTGGAGAC
TTTCTGGACATCTCGATTACTCCGCCCAACCGACTGCCGCCAACCGCCAG
GCGCCAGCGTCCGTACGCAAGCTTTCTAGACCAT
BO22305.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:53:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bin1-RC | 453 | CG6046-PC | 1..450 | 17..466 | 2250 | 100 | Plus |
| Bin1-RB | 453 | CG6046-PB | 1..450 | 17..466 | 2250 | 100 | Plus |
| Bin1-RA | 453 | CG6046-PA | 1..450 | 17..466 | 2250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:53:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bin1-RC | 1240 | CG6046-RC | 689..1141 | 14..466 | 2265 | 100 | Plus |
| Bin1-RB | 3336 | CG6046-RB | 2785..3237 | 14..466 | 2265 | 100 | Plus |
| Bin1-RA | 669 | CG6046-RA | 118..570 | 14..466 | 2265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:53:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16186255..16186640 | 466..81 | 1930 | 100 | Minus |
| 3R | 32079331 | 3R | 16186712..16186780 | 82..14 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:53:35 has no hits.
BO22305.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:38:25 Download gff for
BO22305.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bin1-RA | 117..566 | 17..468 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:34:53 Download gff for
BO22305.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bin1-RA | 117..566 | 17..468 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:29:01 Download gff for
BO22305.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bin1-RA | 121..570 | 17..468 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:29:01 Download gff for
BO22305.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16186252..16186638 | 83..468 | 99 | <- | Minus |
| 3R | 16186712..16186777 | 17..82 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:34:53 Download gff for
BO22305.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12011974..12012360 | 83..468 | 99 | <- | Minus |
| arm_3R | 12012434..12012499 | 17..82 | 100 | | Minus |
BO22305.pep Sequence
Translation from 16 to 484
> BO22305.pep
MANVESMIVEEKTQVKQIDREKTCPMLLRVFCSTGRHHSVSEYMFGNVPT
NELQIYTWQDATLHELTSLVRDVNPDTRKKGTYFDFAVVYPNFRSNHFQM
REIGVTCTGQKGIDDNKTLAQAKFSIGDFLDISITPPNRLPPTARRQRPY
ASFLDH
BO22305.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:06:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bin1-PC | 150 | CG6046-PC | 1..150 | 1..150 | 798 | 100 | Plus |
| Bin1-PB | 150 | CG6046-PB | 1..150 | 1..150 | 798 | 100 | Plus |
| Bin1-PA | 150 | CG6046-PA | 1..150 | 1..150 | 798 | 100 | Plus |
