BO22310.complete Sequence
736 bp assembled on 2009-12-07
GenBank Submission: KX798525
> BO22310.complete
GAAGTTATCAGTCGACATGCATTCCACAATGAGTGTACAACATGGGCTGG
TTGCCCTGGTACTGATCGGCTGTCTGGCACATCCGTGGCACGTCGAGGCC
TGCTCCAGCCGTACGGTGCCCAAGCCGCGCTCTTCGATCTCCTCGTCCAT
GTCCGGCACGGCATTGCCGCCGACCCAGGCTCCAGTCACTAGTAGCACCA
CAATGCGCACCACCACGACGACCACGCCCAGGCCCAATATTACATTCCCC
ACATACAAATGTCCGGAAACCTTCGATGCCTGGTACTGTTTGAACGATGC
CCATTGCTTTGCGGTGAAGATAGCCGATCTACCGGTTTACAGCTGCGAGT
GCGCGATTGGCTTTATGGGACAGCGATGCGAATACAAGGAGATCGACAAT
ACTTACCTGCCCAAGAGGCCGCGTCCGATGTTGGAGAAGGCGAGCATTGC
CAGTGGAGCCATGTGTGCCCTGGTATTTATGCTGTTTGTCTGCCTGGCCT
TCTATTTGCGCTTCGAGCAGCGGGCTGCCAAGAAGGCCTACGAACTGGAG
CAGGAACTGCAGCAGGAATACGACGATGACGACGGCCAGTGCGAGTGCTG
CCGCAACCGGTGCTGTCCAGATGGCCAGGAGCCAGTCATTCTGGAGCGCA
AGCTACCCTACCACATGCGGCTGGAGCACGCGCTAATGTCCTTCGCCATT
CGACGCAGCAACAAGCTGGCAAGCTTTCTAGACCAT
BO22310.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:44:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spi-RF | 705 | CG10334-PF | 1..702 | 17..718 | 3510 | 100 | Plus |
| spi-RG | 705 | CG10334-PG | 1..702 | 17..718 | 3510 | 100 | Plus |
| spi-RA | 705 | CG10334-PA | 1..702 | 17..718 | 3510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:44:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spi-RF | 1457 | CG10334-RF | 360..1061 | 17..718 | 3510 | 100 | Plus |
| spi-RG | 1576 | CG10334-RG | 479..1180 | 17..718 | 3510 | 100 | Plus |
| spi-RA | 1653 | CG10334-RA | 556..1257 | 17..718 | 3510 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:44:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19568296..19568997 | 718..17 | 3510 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 08:44:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 760..835 | 617..540 | 124 | 65.8 | Minus |
| Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 820..859 | 579..540 | 119 | 77.5 | Minus |
BO22310.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:38:27 Download gff for
BO22310.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spi-RA | 565..1266 | 17..720 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:13:12 Download gff for
BO22310.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spi-RA | 556..1257 | 17..720 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:25:39 Download gff for
BO22310.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spi-RA | 556..1257 | 17..720 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:25:39 Download gff for
BO22310.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19568293..19568997 | 17..720 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:13:12 Download gff for
BO22310.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19568293..19568997 | 17..720 | 99 | | Minus |
BO22310.pep Sequence
Translation from 16 to 736
> BO22310.pep
MHSTMSVQHGLVALVLIGCLAHPWHVEACSSRTVPKPRSSISSSMSGTAL
PPTQAPVTSSTTMRTTTTTTPRPNITFPTYKCPETFDAWYCLNDAHCFAV
KIADLPVYSCECAIGFMGQRCEYKEIDNTYLPKRPRPMLEKASIASGAMC
ALVFMLFVCLAFYLRFEQRAAKKAYELEQELQQEYDDDDGQCECCRNRCC
PDGQEPVILERKLPYHMRLEHALMSFAIRRSNKLASFLDH
BO22310.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:06:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spi-PF | 234 | CG10334-PF | 1..234 | 1..234 | 1269 | 100 | Plus |
| spi-PG | 234 | CG10334-PG | 1..234 | 1..234 | 1269 | 100 | Plus |
| spi-PA | 234 | CG10334-PA | 1..234 | 1..234 | 1269 | 100 | Plus |
| spi-PB | 234 | CG10334-PB | 1..234 | 1..234 | 1269 | 100 | Plus |
| spi-PE | 234 | CG10334-PE | 1..234 | 1..234 | 1269 | 100 | Plus |
