BO22335.complete Sequence
1543 bp assembled on 2009-12-07
GenBank Submission: KX799132
> BO22335.complete
GAAGTTATCAGTCGACATGCGGAGCCCAGAAACGGACAGTGAGCACTCGG
AAACGGACTCCGTCGGCTCCTCCACGGACAGTCAGTCGAGTGGATTGGGC
GCGGTGCGCCACCAGCGACGGAGCGCCCAGCGCACGGATGTCTTCAGCCT
CAAGGCCATGGCGCCTAGGCCAAATGCCGGACCCGGCGGCTGGTTATGTC
TACTGCTGCCGCTGGCCTTGACCGTCCGCCTGTTGCGCCACGCCACGCCG
GCATGCAAGGACCAGGCCAGGATGCAGTGTCTCCTCACGGTGGCCGCCGG
CGGTATGGCCCTTGAAACGCTGTGTTTCTTCATCTATGCCTTTGTGAAGA
CGGGCATTTTGGTTAAATGCCTGGTCAGCCTGCTGCCCGGAGTGGCCACC
AGTTTGAGCTTCTATCTGCTGGTGGACACCTCACTGACCTTCGCCATCAT
CGTGGGATTCGTGATGACCTCTGCTTATCAGCAAATCTATATTTACACGC
TACGTGGCTTCCAGAGATCCTTCACGTATGGCGAAGCCTCGGTTTTCGTC
CAGGGACTGGTGCTCTTCGCTTTGAGTGCCATCCATCGACTAGGTGGATT
CTTTTGCGGCGGTTCTTGGCCAACCGAGGAATTTGATACGCTCAACATGA
TCATGGTGAATGCCCTATTTTGCCTGCTGGTGTTCTGCGTGGCTCTCGTC
CTCTTTCCAACGCTGAGGAAGCCATGTCGCTTCTACTTGTGGACGGTGAT
GCTCCTCTTGGCTGTCACCTGCATGCCGGTGACGCGACCTCTTCCTCTGC
TGGCACTTGTGCAGTTCCTGCTCCGCGATCAGGAGAGACTGGCCATCTTG
GTCTTCTATATGCTGCTGGTTGTGCTAACCTGCCTCACAGTCGCCTGGCA
AATTGGAAGCTCCGCTAAGGCCAATACACGTGTGCGCAAGATCTTCCACC
TGCTCATTGTTATGGTCTATATACCCGGATTGATCTTCGAGTGCGCCCTG
CTCTACTTGGCCACTGGCGTGGCGTTGGCTGCTTTCGTGGTCCTGGAGCT
GCTGCGTCTGCTGAAGATACCGCCATTCGCCGATAGACTAGCTGTGGCCT
TTAGCACATTCAAGGACGAAAAGGACGCCGGAGAGTTGGCTCTAACTCCG
TTCTGCTTGCTCATCGGCTGCTCAATGCCCATTTGGATGACACCATGTCC
GTGCTCTGGCGACAATACTCTGGCCTTGCTATCGGGAATTCTAGCTGTCG
GCGTAGGAGACACTGCAGCCAGTGTAGTGGGATCCAAGCTGGGACGCAAC
AAGTGGGGAAGATCTTCCCGATCCCTGGAGGGCACCATTGCGTTCGTGGT
GTCCATTCTCATGGCCGTCTGGCTCCTGGAGATTTCCGGCCTGGTGGCCA
TGAGCCAGGCCAAGTGGTTCGCCACCATTTTCGCAGCACTGAATTCGGCT
CTGGTGGAGGCGTTCACCGACCAGGTGGACAACCTGGTACTACCCCTGAT
ATTCTATACCATTGTGGGCCTGGCCGCAAGCTTTCTAGACCAT
BO22335.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:12:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8311-RA | 1512 | CG8311-PA | 1..1509 | 17..1525 | 7545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:12:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8311-RA | 1897 | CG8311-RA | 137..1645 | 17..1525 | 7545 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:12:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16587603..16588256 | 1311..658 | 3270 | 100 | Minus |
| 2R | 25286936 | 2R | 16588327..16588819 | 658..166 | 2465 | 100 | Minus |
| 2R | 25286936 | 2R | 16587297..16587511 | 1525..1311 | 1075 | 100 | Minus |
| 2R | 25286936 | 2R | 16588896..16589048 | 169..17 | 765 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:12:21 has no hits.
BO22335.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:38:48 Download gff for
BO22335.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8311-RA | 121..1629 | 17..1527 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:16:26 Download gff for
BO22335.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8311-RA | 137..1645 | 17..1527 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:15:42 Download gff for
BO22335.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8311-RA | 137..1645 | 17..1527 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:15:42 Download gff for
BO22335.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16587295..16587511 | 1311..1527 | 99 | <- | Minus |
| 2R | 16587604..16588255 | 659..1310 | 100 | <- | Minus |
| 2R | 16588327..16588816 | 169..658 | 100 | <- | Minus |
| 2R | 16588897..16589048 | 17..168 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:16:26 Download gff for
BO22335.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12474800..12475016 | 1311..1527 | 99 | <- | Minus |
| arm_2R | 12475109..12475760 | 659..1310 | 100 | <- | Minus |
| arm_2R | 12475832..12476321 | 169..658 | 100 | <- | Minus |
| arm_2R | 12476402..12476553 | 17..168 | 100 | | Minus |
BO22335.pep Sequence
Translation from 16 to 1543
> BO22335.pep
MRSPETDSEHSETDSVGSSTDSQSSGLGAVRHQRRSAQRTDVFSLKAMAP
RPNAGPGGWLCLLLPLALTVRLLRHATPACKDQARMQCLLTVAAGGMALE
TLCFFIYAFVKTGILVKCLVSLLPGVATSLSFYLLVDTSLTFAIIVGFVM
TSAYQQIYIYTLRGFQRSFTYGEASVFVQGLVLFALSAIHRLGGFFCGGS
WPTEEFDTLNMIMVNALFCLLVFCVALVLFPTLRKPCRFYLWTVMLLLAV
TCMPVTRPLPLLALVQFLLRDQERLAILVFYMLLVVLTCLTVAWQIGSSA
KANTRVRKIFHLLIVMVYIPGLIFECALLYLATGVALAAFVVLELLRLLK
IPPFADRLAVAFSTFKDEKDAGELALTPFCLLIGCSMPIWMTPCPCSGDN
TLALLSGILAVGVGDTAASVVGSKLGRNKWGRSSRSLEGTIAFVVSILMA
VWLLEISGLVAMSQAKWFATIFAALNSALVEAFTDQVDNLVLPLIFYTIV
GLAASFLDH
BO22335.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:07:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8311-PA | 503 | CG8311-PA | 1..503 | 1..503 | 2555 | 100 | Plus |
