BO22337.complete Sequence
1768 bp assembled on 2010-01-08
GenBank Submission: KX797014
> BO22337.complete
GAAGTTATCAGTCGACATGGCCAGTCGCCAAGCCGGTTTCGTCCTAGACG
CCAAGTCCATGGGTCTGAATCCGTCGAGACCTGCATCATCGCCACCGCCA
CCACCATCATCTGCCAGTCAAATGTGTCGGCAAGTGCAGCCAACCGGAAC
GAGTGCCTCGCATCCACATCAAGAATCGACGCTAAAAGCCTCATCTCCTG
ATCGGTGCACTGCCAGCACCGAGGCGATGTCCACCGAACATTACCGCTGT
CTGATCCAGAAGCTGCGGGATACCAACGGCGATGCTGGCGATATGAGCTT
TGAGCTGAACAGCATATTTCTGAAGCGGCTGGACGAGATTGACTGCCTAG
ATGAGCACGAGGGTGATGACATGCACACTTGCCAGTTGCGTCTGGTCACT
TTTCAGGAGTGGGTGGATTTCCTGCTCCACGTGAACAGCGTGATCCTGGG
CAACGTGTCGGACTTGGAGAAGGAGGCGTACAGCAAGATCGTTGCCTGCT
GTCAGTCTGTCCAAGTGCGACAACAGCATACCCTCGAGGAGAATCGTAGG
CTGCGTGAGGACATTTGTGCGATCATAGAACGCGTGCAGCATTCTCCTCA
CTGCACCGACTTTGATTTCAATGGCATTTCCCTAGAGACACTGACCGTTA
ATCAATTGCGGGGCGTGGGAAAGGATCCCGCCCACGCGGAATGCGAGAGC
GAGAAGATGTCCGAGAGCATGAAGTCCTTAGTCGGCGAGATAGCCGCCAA
GCATGACGAGATCGGCGAACTGAAGTCACAGATCAATGCCTTGGACGAGG
TTGTACACACGGCCAGGCAGAAGTTACTTTTGAAGGATCAGTGCATAGCA
CAGCTCAATCAACAGCTGCACGAGATCACCCGGTGCATTGAGTCCAGAGA
TCAGGCCAAAATGGAGGAATCGCCCAACGATACACTGACCGCGGACGCGA
TTACAAGCGATATGCTCGAGAATCTCTCGATCCACGACACCCAGGAGAGC
GAAATGCTGCGGCTGCTAAACGCGGAGCTCAATGATCTTCTCGATCTGCA
CAACAAACAGGAGTTCCAGACCATTGAGATTCGGCGAAAACGTGTGTCCT
GCTTTATCGAAAAACTGGTATCCGAGCGTGAGGACACTCTGAAAAAACTC
GAGAGCATTCGTAGTCATCTGACAATCCTTCAGTCAGACCTCGATCAATC
CTGCCTAATCTCCGTTGATCCCGAATCAGGGCCCTGTGATCTGGACGCGG
ATGCTCAGATGCTGGAAGCTCTACGTAGACGCCTGCTCAACCTTAGCCAA
CTTAATCGAGAACTGCACGGAAAGTACCAGCGCCTGGACACCGAGTCGAA
AATCAAAATTTCAGAGCTGGAGGCGAGGATTGAATCGGAAAGCAGCGTTC
TTCAAAGAAATAGCGATGTTCTAAGGGAGATCGCCGAACTCATCTGCTCG
TTGGGTTCCAAGGAGTTCTCCTACAACGAAATCTACGACGAATCCTCGAA
AGAAAATCCATTTTGTACGACCATTGCGGATATGTTTGCACGGAAATTCG
AGCAGGAGCAAAATCAAGTGGAAATTGAATGCGATACGAAAACACCTTCC
CAAACAAGGAAGCCAACCAAAACCACCAAAATCCCGGGAGCCACGGCAAA
AACAAACAAACAACAACCAACACCTAAACCTTCAAACAAGCCAACGACAA
CTAAAACTATACCAACGAAAAACACAACTACAACGTTTAGGACCTCCAAG
GCAAGCTTTCTAGACCAT
BO22337.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:49:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| yuri-RC | 1737 | CG31732-PC | 1..1734 | 17..1750 | 8670 | 100 | Plus |
| yuri-RD | 1695 | CG31732-PD | 1..1692 | 59..1750 | 8460 | 100 | Plus |
| yuri-RQ | 2946 | CG31732-PQ | 1..1560 | 17..1576 | 7800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:49:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| yuri-RC | 2555 | CG31732-RC | 566..2300 | 16..1750 | 8675 | 100 | Plus |
| yuri-RD | 2500 | CG31732-RD | 542..2245 | 47..1750 | 8520 | 100 | Plus |
| yuri-RQ | 3658 | CG31732-RQ | 566..2126 | 16..1576 | 7805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:49:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15263770..15264127 | 373..16 | 1790 | 100 | Minus |
| 2L | 23513712 | 2L | 15263332..15263665 | 706..373 | 1670 | 100 | Minus |
| 2L | 23513712 | 2L | 15262373..15262631 | 1119..861 | 1295 | 100 | Minus |
| 2L | 23513712 | 2L | 15262070..15262305 | 1352..1117 | 1180 | 100 | Minus |
| 2L | 23513712 | 2L | 15261464..15261637 | 1750..1577 | 870 | 100 | Minus |
| 2L | 23513712 | 2L | 15262970..15263130 | 865..705 | 805 | 100 | Minus |
| 2L | 23513712 | 2L | 15261717..15261841 | 1577..1453 | 625 | 100 | Minus |
| 2L | 23513712 | 2L | 15261911..15262016 | 1454..1349 | 515 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:49:02 has no hits.
BO22337.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:43 Download gff for
BO22337.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| yuri-RC | 565..2298 | 17..1752 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:01 Download gff for
BO22337.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| yuri-RC | 567..2300 | 17..1752 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:36 Download gff for
BO22337.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| yuri-RC | 567..2300 | 17..1752 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:36 Download gff for
BO22337.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15262070..15262304 | 1118..1352 | 100 | <- | Minus |
| 2L | 15262375..15262626 | 866..1117 | 100 | <- | Minus |
| 2L | 15262970..15263128 | 707..865 | 100 | <- | Minus |
| 2L | 15261912..15262012 | 1353..1453 | 100 | <- | Minus |
| 2L | 15261462..15261637 | 1577..1752 | 98 | <- | Minus |
| 2L | 15261718..15261840 | 1454..1576 | 100 | <- | Minus |
| 2L | 15263332..15263664 | 374..706 | 100 | <- | Minus |
| 2L | 15263770..15264126 | 17..373 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:01 Download gff for
BO22337.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15261462..15261637 | 1577..1752 | 98 | <- | Minus |
| arm_2L | 15261718..15261840 | 1454..1576 | 100 | <- | Minus |
| arm_2L | 15261912..15262012 | 1353..1453 | 100 | <- | Minus |
| arm_2L | 15262070..15262304 | 1118..1352 | 100 | <- | Minus |
| arm_2L | 15262375..15262626 | 866..1117 | 100 | <- | Minus |
| arm_2L | 15262970..15263128 | 707..865 | 100 | <- | Minus |
| arm_2L | 15263332..15263664 | 374..706 | 100 | <- | Minus |
| arm_2L | 15263770..15264126 | 17..373 | 100 | | Minus |
BO22337.pep Sequence
Translation from 16 to 1768
> BO22337.pep
MASRQAGFVLDAKSMGLNPSRPASSPPPPPSSASQMCRQVQPTGTSASHP
HQESTLKASSPDRCTASTEAMSTEHYRCLIQKLRDTNGDAGDMSFELNSI
FLKRLDEIDCLDEHEGDDMHTCQLRLVTFQEWVDFLLHVNSVILGNVSDL
EKEAYSKIVACCQSVQVRQQHTLEENRRLREDICAIIERVQHSPHCTDFD
FNGISLETLTVNQLRGVGKDPAHAECESEKMSESMKSLVGEIAAKHDEIG
ELKSQINALDEVVHTARQKLLLKDQCIAQLNQQLHEITRCIESRDQAKME
ESPNDTLTADAITSDMLENLSIHDTQESEMLRLLNAELNDLLDLHNKQEF
QTIEIRRKRVSCFIEKLVSEREDTLKKLESIRSHLTILQSDLDQSCLISV
DPESGPCDLDADAQMLEALRRRLLNLSQLNRELHGKYQRLDTESKIKISE
LEARIESESSVLQRNSDVLREIAELICSLGSKEFSYNEIYDESSKENPFC
TTIADMFARKFEQEQNQVEIECDTKTPSQTRKPTKTTKIPGATAKTNKQQ
PTPKPSNKPTTTKTIPTKNTTTTFRTSKASFLDH
BO22337.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:04:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| yuri-PC | 578 | CG31732-PC | 1..578 | 1..578 | 2966 | 100 | Plus |
| yuri-PD | 564 | CG31732-PD | 1..564 | 15..578 | 2900 | 100 | Plus |
| yuri-PQ | 981 | CG31732-PQ | 1..520 | 1..520 | 2657 | 100 | Plus |
| yuri-PB | 890 | CG31732-PB | 1..520 | 1..520 | 2657 | 100 | Plus |
| yuri-PI | 260 | CG31732-PI | 1..239 | 1..241 | 1217 | 96.7 | Plus |
