Clone BO22342 Report

Search the DGRC for BO22342

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:223
Well:42
Vector:pDNR-Dual
Associated Gene/TranscriptCG30194-RD
Protein status:BO22342.pep: Imported from assembly
Sequenced Size:2176

Clone Sequence Records

BO22342.complete Sequence

2176 bp assembled on 2010-01-08

GenBank Submission: KX794902

> BO22342.complete
GAAGTTATCAGTCGACATGTGCACCGCTGGCGTGGTTGATGGTGGTGCTG
GGGCCACTACAGGTGGTGCTGATGCGGCTGATAATAGTGGAGCTGCGCCC
GCCCCAAGTTCGACGGCCTTGAACCCCCCACAGGTCTCCATTTCCATGAA
CGAACCGGAAAACCTGAAACCACCTGCCAAATCCAACTTCCGCCGTTATC
TTCAGTGGATCCTAGCACCTGTCCTGACCGCCATTTCCGGTCTGATCCTC
TACTACCAAGGGCCTTGGTATGGAGTGGCCACGCTATATGCCGCATTGAT
ATCCATACTGCTGGTGCGTCCAGGATGGCGCTGGTTCTACATTGCAGCTG
TTACCACACCCAGGGATACTGTAGCCCTCTTTGCCTACATCCGTGTGCTG
CTCTTCATTAAGCGCCAGGAGCGCAAGAACCTGAACATCGGAGACATCTT
TGAGTCAAATGTGGCCCGGCAGCCGGATAAACTGGCCATTGTCAGTGAGT
CCCAGCAGTGGACCTTCCGCCAGGTGAACGAGCATTCGAACCGGGTGGCC
AACGTGTTCCACAGTCACGGCTACAAAAAGGGCGACGTGGTGGGTCTGCT
GCTCGAGAATCGCGCCGAATTTGTAGCCACCTGGCTTGGTCTCTCCAAGA
TCGGCGTGATCACGCCGCTGATTAACACAAACCTCCGTGGAGCCTCACTG
CAGCACAGCATTACCGTGGGCCAGTGCACGGCGCTCATTTACGGCGCCAG
TTTCCGGTCGGCCGTGATGGATATCGCCAAGGATCTGCCCGCCCACGTCG
GACTGTATCAGTTCAACGACGAGTCCAACCAGGAGGTGGTGGCTTCCGAG
GGCCTTAGCCAGGGACTGGCCCAGCAGTTGAACGGCCTTCTGGAGACGGC
GGCCAAGGATAAGGTGGCCGCCGGCGCTTCTCGGGCGGATCATCACGACA
AGTTGGTCTACATCTACACGTCGGGCACCACGGGCTTGCCCAAGGCAGCC
GTCATCACGCATTCTCGGTACTTTTTCATAGCTGCCGGCATTCACTACAC
GCTTGGCTTCAAGGATCAGGATGTGTTCTATACTCCCTTGCCCCTATATC
ACACCGCTGGCGGAGTGATGAGCATGGGCCAGGCCTTACTCTTCGGCTCC
ACCGTGGTCATAAGGAAGAAATTCAGCGCCTCCGGTTACTTTTCAGACTG
CGCCCGCTTCCAATGCACGGTGGGACAGTACATTGGGGAGATGGCGCGCT
ACATCCTGGCCACGCCATCGGCTCCTCACGATCGGAACCACCAAGTGCGA
ATGGTGTTCGGAAATGGACTGCGTCCACAGATTTGGCCGCAGTTCGTGGA
GCGCTTCGGGATTCGAAAAGTGGGCGAGTTCTACGGAGCCACTGAGGGCA
ATGCCAACATCATGAACAATGACAGCACAGTGGGCGCCATTGGATTCATA
TCCCGCATACTGCCGCAGATCTACCCAATATCGATCATAAAAGCAGATCC
ACATACGGGAGAGCCTTTGAGGAACAGCCAAGGACTGTGTGAGAGATGCG
AGGCGGATGAGCCAGGCGTCTTCGTTGGAAAGATTGTGCGGGGTAATCCC
TGCCGTGAGTTCCTCGGCTACGTTGACCAGAAGGCCTCCTCCAAGAAGGT
GGTCCACGATGTCTTCTCCAAGGGCGACATGGCCTTCATCTCGGGCGATC
TGCTGGTGGCCGATGAGCGGGGCTATCTGTACTTCAAAGATCGGACCGGC
GACACTTTCCGCTGGAAGGGTGAGAATGTCTCCACCAGCGAGGTGGAGGC
GCAGTTGAGTAATCTGGCTGGCTACAAGGATGTGATTGTGTACGGCGTAA
GCATACCCAACACTGAGGGCAGAGCAGGAATGGCAGCCATCTACGATCCC
ACTCGGGAGGTCAACGTCAGCCAGCTGGGCGTGGAACTGGCCAAATCCCT
GCCCAACTACGCCAGGCCGCAGTTTCTCAGATTCCTGCGCAAAATCGACC
TGACGGGCACCTTCAAGTTGCGCAAGGTGGAGCTTCAGCAGCAGGGCTTC
AATCCGGAGATCATCGACGATGAACTCTTCTACGCCCAACCGGATGGCGT
GTATGCTCCACTCACCCCATCCGTATACGAGAGGATAGTTAGAAACGAGC
TGCGATTCGCAAGCTTTCTAGACCAT

BO22342.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:48:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG44252-RD 2145 CG44252-PD 1..2142 17..2158 10710 100 Plus
CG44252-RE 2145 CG44252-PE 1..2142 17..2158 10710 100 Plus
CG44252-RB 2112 CG44252-PB 83..2109 132..2158 10135 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:49:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG44252-RD 2651 CG44252-RD 205..2356 7..2158 10715 99.9 Plus
CG44252-RE 2745 CG44252-RE 299..2450 7..2158 10715 99.9 Plus
CG44252-RB 2538 CG44252-RB 217..2243 132..2158 10135 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:48:56
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23060315..23061254 1219..2158 4700 100 Plus
2R 25286936 2R 23059352..23059999 373..1020 3240 100 Plus
2R 25286936 2R 23059053..23059293 132..372 1205 100 Plus
2R 25286936 2R 23060055..23060259 1017..1221 1025 100 Plus
2L 23513712 2L 10511929..10512602 1899..1226 955 76.1 Minus
2L 23513712 2L 10513191..10513446 746..491 620 82.8 Minus
2R 25286936 2R 23057507..23057635 7..135 600 97.7 Plus
2L 23513712 2L 10512933..10513008 1019..944 185 82.9 Minus
Blast to na_te.dros performed on 2014-11-28 02:48:57 has no hits.

BO22342.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:40 Download gff for BO22342.complete
Subject Subject Range Query Range Percent Splice Strand
CG30194-RD 193..2334 17..2160 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:00 Download gff for BO22342.complete
Subject Subject Range Query Range Percent Splice Strand
CG44252-RE 309..2450 17..2160 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:34 Download gff for BO22342.complete
Subject Subject Range Query Range Percent Splice Strand
CG44252-RE 309..2450 17..2160 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:34 Download gff for BO22342.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23057517..23057633 17..133 100 -> Plus
2R 23059055..23059293 134..372 100 -> Plus
2R 23059352..23059996 373..1017 100 -> Plus
2R 23060056..23060257 1018..1219 100 -> Plus
2R 23060316..23061254 1220..2160 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:00 Download gff for BO22342.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18945040..18945156 17..133 100 -> Plus
arm_2R 18946578..18946816 134..372 100 -> Plus
arm_2R 18946875..18947519 373..1017 100 -> Plus
arm_2R 18947579..18947780 1018..1219 100 -> Plus
arm_2R 18947839..18948777 1220..2160 99   Plus

BO22342.pep Sequence

Translation from 16 to 2176

> BO22342.pep
MCTAGVVDGGAGATTGGADAADNSGAAPAPSSTALNPPQVSISMNEPENL
KPPAKSNFRRYLQWILAPVLTAISGLILYYQGPWYGVATLYAALISILLV
RPGWRWFYIAAVTTPRDTVALFAYIRVLLFIKRQERKNLNIGDIFESNVA
RQPDKLAIVSESQQWTFRQVNEHSNRVANVFHSHGYKKGDVVGLLLENRA
EFVATWLGLSKIGVITPLINTNLRGASLQHSITVGQCTALIYGASFRSAV
MDIAKDLPAHVGLYQFNDESNQEVVASEGLSQGLAQQLNGLLETAAKDKV
AAGASRADHHDKLVYIYTSGTTGLPKAAVITHSRYFFIAAGIHYTLGFKD
QDVFYTPLPLYHTAGGVMSMGQALLFGSTVVIRKKFSASGYFSDCARFQC
TVGQYIGEMARYILATPSAPHDRNHQVRMVFGNGLRPQIWPQFVERFGIR
KVGEFYGATEGNANIMNNDSTVGAIGFISRILPQIYPISIIKADPHTGEP
LRNSQGLCERCEADEPGVFVGKIVRGNPCREFLGYVDQKASSKKVVHDVF
SKGDMAFISGDLLVADERGYLYFKDRTGDTFRWKGENVSTSEVEAQLSNL
AGYKDVIVYGVSIPNTEGRAGMAAIYDPTREVNVSQLGVELAKSLPNYAR
PQFLRFLRKIDLTGTFKLRKVELQQQGFNPEIIDDELFYAQPDGVYAPLT
PSVYERIVRNELRFASFLDH

BO22342.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:04:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG44252-PD 714 CG44252-PD 1..714 1..714 3710 100 Plus
CG44252-PE 714 CG44252-PE 1..714 1..714 3710 100 Plus
CG44252-PB 703 CG44252-PB 28..703 39..714 3508 99.9 Plus
Fatp-PE 626 CG7400-PE 4..626 87..714 2345 69.3 Plus
Fatp-PD 668 CG7400-PD 46..668 87..714 2345 69.3 Plus