Clone BO22352 Report

Search the DGRC for BO22352

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:223
Well:52
Vector:pDNR-Dual
Associated Gene/TranscriptCG15236-RA
Protein status:BO22352.pep: full length peptide match
Sequenced Size:2455

Clone Sequence Records

BO22352.complete Sequence

2455 bp assembled on 2010-01-08

GenBank Submission: KX800006

> BO22352.complete
GAAGTTATCAGTCGACATGCCATCCGTGAAATCCGCCGAAAGTGAGATTC
TTCTTGGGATTATAAGGAGCGACAGCATGACGAGCGGCAATTCCCTGAGG
TCCTGCCTCCTGCTGGCCACCATCCTGGGATTACTCTGCCGGACGAAGGC
TTTGCCCTTTGAGTATTTAGACGAGCACGAGGACTTCAACTACGACCTGG
ACACGGCGCAGTCCCAGGCCAAGTACGACGCCCGTCTGCTCTCGCAGCAG
ATGCTCAGCGATGCAGAGCTGCAGCGGCAGGGGCTGAGCGACGGCCAGGA
CAACGCCCTGGATGGCGACTCCGCGGCAGCTCAGGGGACTGGAGCAGGGT
CCCACTTGGATGCGGTATCCTCTGTCCACGACGACCTGGAGCCGCACAGC
AGGGCAGCGGCGTGCTTCACCAACGGGCACAAGTACACGCACGGACAGAA
GGTTCCGCGCCTGGATGCCTGCGAGGTGTGTCTCTGCATGGACGGCGAGA
TCTTCTGCTGGTGGGAGAAGTGCGATAAGGCCAATGTAAACAAGGCGAGG
ACGGCGGGGGACAACGCAGGACTTGGACTTGGTGTCGAGGACGACGGCGA
CGGCAATGGCAATGGCGATGGCGATGGTGACTATTCAGATCCATATCGCC
ACGAGAGCACAACGGGAAAGTCAACAAAAGTGCATAAAGCGGCGAGGAAA
GTTGGCAAGCGGCATAAGCATCGCAAGAATCAAAAGAATTTTAATGACTA
CGAAGTTTACCACAGCCAGCGGGAGAAGCAGCAGCAGCAGCAGTCGGATT
ATAAAAAGTCCGCCATAAAGCAGCAGCTCCAGATGCAGCAAAAACACAAA
AGCGACAAGAGCGGTGCTGGCAACTACAATATAATCAAGCAACACAAACA
CGAGCAGCAGCAGCAGCAGCTCAAAATACCGCAGCAGCTACATCAGCAAC
AGCAGCAACAGAATGTGGCAGCTTTGGGTGTTAATCACGCAGCAAAGGCA
ACGCATTATCAGCAGGCAGCTTCGACGCCCCTGCCAACTCCCCCACCCCC
GTCGGAGCACCCGCAGCACAGCCACCACCCACACCAACAGGCGCACTCGT
CCAGCAAAATCCTCAACTTCCCCGAGAACTTGCCAGCCCTGCTCTACTAC
GACTACAAGACGGAGGAGCACGAGCACCACCAGCACCAGCACCACCAGCA
GCACTTGCTGCACGAAAAACAGCGCTTGCTGCAGCAGCAGCAGCAGCAAC
AGCAACAGCAGCAGCAGATGGTGCAGCAAGAGGCGTTGGCGCGACAAAAG
GCATCTGAATCCGCATCTGAGCCCGAATCGCGGGCCGGAGGCACAGCAGA
GGGAGGCGTTGAACCCAGCGGAGACTTGGCCGCTGATAAAAACTCTGATG
AGGCGGAAACCGACAGCGATATTCTGCCAGAGCCGCCTACAAAGCAGCCC
AGGGCAGCTGCCACACAATGGCCAACTCCATCTAGTAACAGCTCGGCCAG
GGCGTTGATGACGAGCAACGTGGCATCCACATCCACGGCTGCGACAACGA
CAACGACAAAGACATCGAAAACGAAAACGACAACGGCGACAACGGGAAGG
ACGACGACGACGACAACGGCGACAGGCACAAATGAAATGGTGACAAGCAC
GCTGTCTGGAATGGAGAAGTCCGGGGCCACAGTTGCAGCCACAGATCTTG
GACAGATGCAACCCGATCGCCGTGGACCAGACGCGGAGCGAGACGACGCC
TTCCACCGCTGGCTGACATCCACCGAGCTGAATGCTGACAACACAAACTC
CATGGACGACAGCCTGGAGCGGGAAACGCCGGCATCGACAATAATCGATG
ATGTTGGCACGGCCAACAAGAGTGACAGGAGCATCGGCGGCATCGGTGGC
ATCGGCAAAGACAATGGCAACGACGCCGTCTTCTTTCGCAGCTCGTACAA
CGATTACAGCAGCGAATTCAATGGGAGCGTTGTCAATATTGACATTACAC
TAACTGCAGTTGATGTGCATCCCCGTCGCCAAACGGATTTAATTGCAAAT
GGCAACAGAACGTCAGGCGCTAACGACAATGGCAACAGCTGTAGCAGCCA
GGTTGGAGCAGCAGGAACAACAATGAACCCAGTGGCAGTCAGCACCAGCA
GCAGCACCAGGAGCAGCAACAATCAGGATCAGCCTCAGCAGAGCCCTGTT
GTCCCGCCGTACACCCTGACAACGATTATAACAACTGCGCCGATGGCACC
AGGGCGTATGTGCAATGTTTTGGGCAAACTGTATAAAATTGGTGACATTC
TGCCGCAGGACACGGGCAACTGCCTGCAGTGCATTTGCACGGATGCCGTG
ACTCCCGACGAGATGCCGAGCGTCACCTGCAGTCCGCACAATTGCCCACC
GCTGGTTCTTCCGGATCTGTTCGATGCGACTGGTTACGCAAGCTTTCTAG
ACCAT

BO22352.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:48:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG15236-RA 2424 CG15236-PA 1..2421 17..2437 12105 100 Plus
CG15236-RB 2424 CG15236-PB 1..2421 17..2437 12105 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:48:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG15236-RA 4817 CG15236-RA 727..3147 17..2437 12105 100 Plus
CG15236-RB 4758 CG15236-RB 668..3088 17..2437 12105 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:48:33
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6833754..6834926 524..1696 5865 100 Plus
2R 25286936 2R 6835493..6836070 1697..2274 2890 100 Plus
2R 25286936 2R 6832629..6832933 149..453 1525 100 Plus
2R 25286936 2R 6836526..6836690 2273..2437 825 100 Plus
2R 25286936 2R 6829916..6830048 17..149 665 100 Plus
2R 25286936 2R 6833613..6833687 450..524 375 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:48:34 has no hits.

BO22352.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:35 Download gff for BO22352.complete
Subject Subject Range Query Range Percent Splice Strand
CG15236-RA 534..2954 17..2439 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:50 Download gff for BO22352.complete
Subject Subject Range Query Range Percent Splice Strand
CG15236-RB 668..3088 17..2439 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:28 Download gff for BO22352.complete
Subject Subject Range Query Range Percent Splice Strand
CG15236-RB 668..3088 17..2439 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:28 Download gff for BO22352.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6829916..6830048 17..149 100 -> Plus
2R 6832630..6832931 150..451 100 -> Plus
2R 6833615..6833687 452..524 100 -> Plus
2R 6833755..6834926 525..1696 100 -> Plus
2R 6835493..6836069 1697..2273 100 -> Plus
2R 6836527..6836690 2274..2439 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:50 Download gff for BO22352.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2717421..2717553 17..149 100 -> Plus
arm_2R 2720135..2720436 150..451 100 -> Plus
arm_2R 2721120..2721192 452..524 100 -> Plus
arm_2R 2721260..2722431 525..1696 100 -> Plus
arm_2R 2722998..2723574 1697..2273 100 -> Plus
arm_2R 2724032..2724195 2274..2439 98   Plus

BO22352.pep Sequence

Translation from 16 to 2455

> BO22352.pep
MPSVKSAESEILLGIIRSDSMTSGNSLRSCLLLATILGLLCRTKALPFEY
LDEHEDFNYDLDTAQSQAKYDARLLSQQMLSDAELQRQGLSDGQDNALDG
DSAAAQGTGAGSHLDAVSSVHDDLEPHSRAAACFTNGHKYTHGQKVPRLD
ACEVCLCMDGEIFCWWEKCDKANVNKARTAGDNAGLGLGVEDDGDGNGNG
DGDGDYSDPYRHESTTGKSTKVHKAARKVGKRHKHRKNQKNFNDYEVYHS
QREKQQQQQSDYKKSAIKQQLQMQQKHKSDKSGAGNYNIIKQHKHEQQQQ
QLKIPQQLHQQQQQQNVAALGVNHAAKATHYQQAASTPLPTPPPPSEHPQ
HSHHPHQQAHSSSKILNFPENLPALLYYDYKTEEHEHHQHQHHQQHLLHE
KQRLLQQQQQQQQQQQQMVQQEALARQKASESASEPESRAGGTAEGGVEP
SGDLAADKNSDEAETDSDILPEPPTKQPRAAATQWPTPSSNSSARALMTS
NVASTSTAATTTTTKTSKTKTTTATTGRTTTTTTATGTNEMVTSTLSGME
KSGATVAATDLGQMQPDRRGPDAERDDAFHRWLTSTELNADNTNSMDDSL
ERETPASTIIDDVGTANKSDRSIGGIGGIGKDNGNDAVFFRSSYNDYSSE
FNGSVVNIDITLTAVDVHPRRQTDLIANGNRTSGANDNGNSCSSQVGAAG
TTMNPVAVSTSSSTRSSNNQDQPQQSPVVPPYTLTTIITTAPMAPGRMCN
VLGKLYKIGDILPQDTGNCLQCICTDAVTPDEMPSVTCSPHNCPPLVLPD
LFDATGYASFLDH

BO22352.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:03:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG15236-PA 807 CG15236-PA 1..807 1..807 4254 100 Plus
CG15236-PB 807 CG15236-PB 1..807 1..807 4254 100 Plus
Smr-PF 3601 CG4013-PF 22..307 192..474 217 26.9 Plus
Smr-PE 3601 CG4013-PE 22..307 192..474 217 26.9 Plus
Smr-PD 3601 CG4013-PD 22..307 192..474 217 26.9 Plus
Smr-PF 3601 CG4013-PF 21..300 192..460 204 24.3 Plus
Smr-PE 3601 CG4013-PE 21..300 192..460 204 24.3 Plus
Smr-PF 3601 CG4013-PF 108..398 203..467 190 25.5 Plus
Smr-PE 3601 CG4013-PE 108..398 203..467 190 25.5 Plus