BO22364.complete Sequence
4081 bp assembled on 2010-01-08
GenBank Submission: KX799465
> BO22364.complete
GAAGTTATCAGTCGACATGTCGCAGCATTTCACATCGATATTTGAGAACC
TGCGATTCGTGACCATCAAACGTTCGACAAATGCGCAACAGCAACAGCAG
CAGCAGCAACAGCAACTGCAGCAGCAGCAGCAGCAGCTGCAGCAACAGAA
GGCACAGACACAGCAACAAAATAGCAGAAAAATCAAAACTCAAGCAACGC
CAACGTTGAATGGCAATGGGCTCTTGAGCGGCAATCCAAATGGCGGAGGC
GGTGACTCCTCGCCCAGCCATGAAGTGGACCATCCGGGTGGAGCACAAGG
AGCTCAAGCAGCAGGAGGCTTGCCATCTTCAAGTGGCACGCCATTGAGGC
ACCACAAGCGCGCCAGTATCTCCACAGCATCGCCTCCAATCCGCGAACGG
CGTGGCACCAACACCAGCATCGTGGTCGAACTGGATGGCAGTGGCAGCGG
GAGTGGGAGTGGCGGTGGTGGCGTTGGCGTTGGTCAGGGTGCGGGTTGTC
CTCCCTCGGGCAGCTGCACTGCGTCCGGAAAAAGTTCGCGGGAACTATCG
CCGTCGCCGAAAAACCAACAGCAGCCCAGAAAGATGTCACAGGATTATCG
GTCGCGTGCCGGCAGTTTTATGCACCTGGACGACGAGGGACGCAGTCTGC
TGATGCGCAAGCCGATGAGACTGAAGAACATCGAGGGCAGGCCGGAGGTC
TACGACACGCTGCACTGCAAGGGTCGCGAGATTCTTTCCTGCTCGAAGGC
CACCTGTACGAGCAGCATTATGAACATTGGCAATGCGGCGGTGGAGGCCA
GGAAATCCGATCTGATCCTCGAACACGCCAAGGACTTCCTCGAGCAGTAC
TTTACATCGATAAAGCGTACATCATCTACCGCCCACGAGACGCGATGGAA
ACAGGTGCGCCAGAGCATTGAGACCACTGGACATTATCAGCTAACCGAAA
CGGAACTAATTTATGGTGCCAAATTGGCCTGGCGCAATTCTTCACGTTGC
ATTGGCCGAATACAATGGTCGAAGTTGCAGGTCTTTGACTGTCGGTATGT
GACAACAACAAGTGGCATGTTTGAAGCCATTTGCAATCACATTAAATATG
CAACAAATAAGGGCAACCTGAGATCGGCCATCACGATATTTCCACAACGC
ACAGATGCCAAGCATGATTATCGCATTTGGAATAACCAATTAATATCTTA
TGCCGGCTACAAGCAGGCGGATGGGAAAATCATTGGCGATCCCATGAATG
TGGAGTTTACAGAGGTCTGCACCAAGCTGGGCTGGAAGAGCAAGGGCAGC
GAGTGGGACATACTGCCATTGGTGGTCTCGGCCAATGGTCACGATCCGGA
CTACTTTGATTACCCGCCCGAATTGATACTGGAAGTTCCGCTGACCCATC
CAAAATTCGAATGGTTCTCGGATCTGGGACTGCGATGGTACGCCCTGCCC
GCCGTATCCAGTATGCTGTTCGATGTGGGCGGCATTCAGTTTACGGCCAC
CACATTCAGTGGTTGGTACATGTCGACAGAGATTGGCAGCCGGAATTTAT
GCGACACAAATCGCCGCAATATGCTGGAGACGGTGGCGCTGAAGATGCAA
CTGGACACCCGTACGCCCACATCCTTGTGGAAGGACAAGGCTGTGGTGGA
GATGAACATTGCCGTGCTCCACTCCTACCAGAGTCGCAACGTGACCATTG
TGGATCACCACACGGCCAGCGAGAGCTTTATGAAGCATTTCGAGAACGAG
TCCAAGCTCAGGAATGGGTGTCCCGCTGATTGGATTTGGATCGTGCCGCC
GCTGTCGGGCTCCATAACGCCGGTATTCCATCAGGAGATGGCTCTGTACT
ACCTGAAGCCCTCGTTCGAGTACCAGGATCCCGCCTGGCGAACCCACGTG
TGGAAGAAGGGGCGTGGCGAGAGCAAGGGCAAGAAGCCAAGACGTAAATT
CAATTTTAAACAAATCGCTAGGGCTGTGAAATTTACATCGAAACTATTTG
GACGCGCCTTATCGAAACGCATAAAGGCAACAGTTCTATATGCCACCGAA
ACTGGCAAATCGGAGCAATATGCGAAGCAACTTTGTGAACTCCTAGGGCA
CGCATTCAATGCACAGATATATTGCATGTCCGACTACGATATATCCTCCA
TTGAGCACGAGGCATTGTTAATTGTTGTGGCCTCCACCTTTGGCAACGGT
GATCCGCCCGAAAACGGCGAGCTTTTCTCCCAGGAATTGTATGCGATGCG
TGTCCAGGAGTCTTCCGAGCATGGATTGCAGGACTCCAGCATTGGCTCGT
CAAAGTCCTTCATGAAGGCCAGCTCGCGGCAGGAGTTCATGAAGCTGCCA
CTGCAACAGGTGAAGAGAATCGACCGCTGGGACTCGCTGCGGGGCTCCAC
CTCGGACACCTTCACCGAGGAGACCTTTGGCCCCCTCTCCAATGTCCGGT
TCGCCGTTTTTGCCCTCGGCTCCTCGGCCTATCCAAATTTCTGCGCCTTC
GGTCAGTATGTGGACAACATTCTGGGCGAGCTGGGCGGCGAACGCCTGCT
GAGGGTGGCCTACGGCGACGAGATGTGCGGACAGGAGCAGTCGTTCCGGA
AGTGGGCGCCCGAGGTATTCAAGTTGGCCTGCGAGACCTTCTGCCTGGAT
CCAGAGGAGAGCCTTTCGGATGCCTCGCTAGCCCTGCAGAACGATTCGCT
GACTGTGAATACGGTGCGCCTGGTGCCGTCGGCGAATAAGGGATCCCTGG
ACAGCAGCTTATCCAAGTACCACAACAAGAAGGTGCACTGCTGCAAGGCG
AAGGCGAAGCCCCACAATTTGACCCGTTTGAGTGAGGGAGCCAAGACAAC
GATGCTGCTGGAGATCTGTGCACCTGGCTTGGAGTACGAGCCGGGTGATC
ATGTGGGCATCTTTCCGGCGAATCGAACGGAACTGGTCGACGGACTGCTA
AATCGACTGGTGGGTGTGGATAATCCCGACGAGGTGCTGCAGTTGCAATT
GCTAAAGGAAAAGCAGACATCGAATGGTATATTCAAGTGCTGGGAGCCGC
ACGACAAAATACCGCCGGATACTCTAAGGAATCTTCTGGCCCGATTCTTT
GATCTGACCACTCCGCCATCGCGACAGTTGCTCACCCTGCTGGCAGGATT
CTGTGAGGATACCGCGGACAAGGAGCGGCTGGAGTTGCTGGTCAACGATT
CGTCGGCCTACGAGGACTGGCGGCACTGGCGGCTGCCCCATCTGCTGGAC
GTTCTCGAGGAGTTCCCCTCGTGCCGACCACCGGCTCCCCTTCTGCTTGC
CCAACTAACGCCGCTGCAGCCTCGCTTCTATTCCATTTCTTCGTCGCCGC
GCCGCGTTAGTGACGAAATCCACCTCACGGTGGCCATCGTGAAGTACCGC
TGTGAAGATGGCCAGGGAGACGAGCGGTATGGCGTGTGCTCTAACTATCT
ATCCGGCTTGCGGGCAGACGACGAGCTGTTCATGTTCGTGAGGAGCGCCT
TGGGCTTCCATTTGCCCAGCGATCGGAGTCGTCCCATTATTCTGATTGGT
CCTGGCACAGGAATAGCTCCATTCCGCTCCTTTTGGCAGGAGTTCCAGGT
GCTAAGCGACCTTGATCCCACGGCCAAATTGCCCAAGATGTGGCTCTTCT
TTGGCTGCCGTAATCGGGATGTCGATTTGTACGCCGAGGAGAAGGCAGAG
CTACAGAAGGATCAAATCCTAGACCGAGTTTTTCTCGCTCTGTCCAGGGA
GCAGGCCATTCCGAAGACATATGTGCAGGACCTGATTGAGCAGGAATTCG
ATTCGTTGTACCAGTTGATTGTCCAGGAGCGGGGCCACATCTACGTCTGC
GGCGATGTCACAATGGCCGAGCATGTGTACCAGACCATCAGGAAGTGCAT
TGCCGGCAAAGAGCAGAAAAGCGAGGCGGAAGTTGAGACATTTTTGCTAA
CACTGCGGGACGAAAGTCGCTACCACGAGGACATCTTTGGCATCACGCTG
CGAACGGCTGAGATACACACAAAGTCAAGGGCCACGGCCAGGATACGAAT
GGCCTCCCAGCCAGCAAGCTTTCTAGACCAT
BO22364.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:48:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nos-RA | 4050 | CG6713-PA | 1..4047 | 17..4063 | 20220 | 100 | Plus |
| Nos-RK | 3297 | CG6713-PK | 1..3294 | 770..4063 | 16455 | 100 | Plus |
| Nos-RF | 2271 | CG6713-PF | 1..2205 | 17..2221 | 11025 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:48:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nos-RA | 4696 | CG6713-RA | 402..4448 | 17..4063 | 20220 | 100 | Plus |
| Nos-RK | 4000 | CG6713-RK | 416..3752 | 727..4063 | 16670 | 100 | Plus |
| Nos-RF | 4805 | CG6713-RF | 402..2606 | 17..2221 | 11025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:48:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10805985..10807129 | 3766..2622 | 5710 | 99.9 | Minus |
| 2L | 23513712 | 2L | 10831329..10831927 | 615..17 | 2995 | 100 | Minus |
| 2L | 23513712 | 2L | 10807291..10807627 | 2623..2287 | 1685 | 100 | Minus |
| 2L | 23513712 | 2L | 10816023..10816235 | 1972..1760 | 1065 | 100 | Minus |
| 2L | 23513712 | 2L | 10816962..10817146 | 1762..1578 | 925 | 100 | Minus |
| 2L | 23513712 | 2L | 10818392..10818566 | 1579..1405 | 875 | 100 | Minus |
| 2L | 23513712 | 2L | 10825672..10825837 | 1032..867 | 830 | 100 | Minus |
| 2L | 23513712 | 2L | 10813301..10813447 | 2116..1970 | 735 | 100 | Minus |
| 2L | 23513712 | 2L | 10822966..10823111 | 1266..1121 | 730 | 100 | Minus |
| 2L | 23513712 | 2L | 10822107..10822248 | 1404..1263 | 710 | 100 | Minus |
| 2L | 23513712 | 2L | 10825949..10826087 | 867..729 | 695 | 100 | Minus |
| 2L | 23513712 | 2L | 10805618..10805745 | 3892..3765 | 640 | 100 | Minus |
| 2L | 23513712 | 2L | 10830600..10830718 | 730..612 | 595 | 100 | Minus |
| 2L | 23513712 | 2L | 10812464..10812570 | 2221..2115 | 535 | 100 | Minus |
| 2L | 23513712 | 2L | 10804522..10804627 | 4063..3958 | 530 | 100 | Minus |
| 2L | 23513712 | 2L | 10823761..10823858 | 1122..1025 | 490 | 100 | Minus |
| 2L | 23513712 | 2L | 10804829..10804899 | 3959..3889 | 355 | 100 | Minus |
| 2L | 23513712 | 2L | 10812287..10812356 | 2289..2220 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:48:18 has no hits.
BO22364.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:31 Download gff for
BO22364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nos-RB | 513..2717 | 17..2221 | 100 | -> | Plus |
| Nos-RB | 2827..4668 | 2222..4065 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:43 Download gff for
BO22364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nos-RA | 402..4448 | 17..4065 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:22 Download gff for
BO22364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nos-RA | 402..4448 | 17..4065 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:22 Download gff for
BO22364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10805619..10805743 | 3767..3891 | 100 | <- | Minus |
| 2L | 10804520..10804626 | 3959..4065 | 98 | <- | Minus |
| 2L | 10804830..10804896 | 3892..3958 | 100 | <- | Minus |
| 2L | 10825949..10826085 | 731..867 | 100 | <- | Minus |
| 2L | 10830600..10830714 | 616..730 | 100 | <- | Minus |
| 2L | 10805985..10807127 | 2624..3766 | 99 | <- | Minus |
| 2L | 10807291..10807624 | 2290..2623 | 100 | <- | Minus |
| 2L | 10812287..10812354 | 2222..2289 | 100 | <- | Minus |
| 2L | 10812464..10812568 | 2117..2221 | 100 | <- | Minus |
| 2L | 10813301..10813445 | 1972..2116 | 100 | <- | Minus |
| 2L | 10816024..10816233 | 1762..1971 | 100 | <- | Minus |
| 2L | 10816963..10817144 | 1580..1761 | 100 | <- | Minus |
| 2L | 10818392..10818566 | 1405..1579 | 100 | <- | Minus |
| 2L | 10822107..10822246 | 1265..1404 | 100 | <- | Minus |
| 2L | 10822968..10823109 | 1123..1264 | 100 | <- | Minus |
| 2L | 10823761..10823852 | 1031..1122 | 100 | <- | Minus |
| 2L | 10825674..10825836 | 868..1030 | 100 | <- | Minus |
| 2L | 10831329..10831927 | 17..615 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:43 Download gff for
BO22364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10825949..10826085 | 731..867 | 100 | <- | Minus |
| arm_2L | 10830600..10830714 | 616..730 | 100 | <- | Minus |
| arm_2L | 10805619..10805743 | 3767..3891 | 100 | <- | Minus |
| arm_2L | 10804520..10804626 | 3959..4065 | 98 | <- | Minus |
| arm_2L | 10804830..10804896 | 3892..3958 | 100 | <- | Minus |
| arm_2L | 10805985..10807127 | 2624..3766 | 99 | <- | Minus |
| arm_2L | 10807291..10807624 | 2290..2623 | 100 | <- | Minus |
| arm_2L | 10812287..10812354 | 2222..2289 | 100 | <- | Minus |
| arm_2L | 10812464..10812568 | 2117..2221 | 100 | <- | Minus |
| arm_2L | 10813301..10813445 | 1972..2116 | 100 | <- | Minus |
| arm_2L | 10816024..10816233 | 1762..1971 | 100 | <- | Minus |
| arm_2L | 10816963..10817144 | 1580..1761 | 100 | <- | Minus |
| arm_2L | 10818392..10818566 | 1405..1579 | 100 | <- | Minus |
| arm_2L | 10822107..10822246 | 1265..1404 | 100 | <- | Minus |
| arm_2L | 10822968..10823109 | 1123..1264 | 100 | <- | Minus |
| arm_2L | 10823761..10823852 | 1031..1122 | 100 | <- | Minus |
| arm_2L | 10825674..10825836 | 868..1030 | 100 | <- | Minus |
| arm_2L | 10831329..10831927 | 17..615 | 100 | | Minus |
BO22364.pep Sequence
Translation from 16 to 4081
> BO22364.pep
MSQHFTSIFENLRFVTIKRSTNAQQQQQQQQQQLQQQQQQLQQQKAQTQQ
QNSRKIKTQATPTLNGNGLLSGNPNGGGGDSSPSHEVDHPGGAQGAQAAG
GLPSSSGTPLRHHKRASISTASPPIRERRGTNTSIVVELDGSGSGSGSGG
GGVGVGQGAGCPPSGSCTASGKSSRELSPSPKNQQQPRKMSQDYRSRAGS
FMHLDDEGRSLLMRKPMRLKNIEGRPEVYDTLHCKGREILSCSKATCTSS
IMNIGNAAVEARKSDLILEHAKDFLEQYFTSIKRTSSTAHETRWKQVRQS
IETTGHYQLTETELIYGAKLAWRNSSRCIGRIQWSKLQVFDCRYVTTTSG
MFEAICNHIKYATNKGNLRSAITIFPQRTDAKHDYRIWNNQLISYAGYKQ
ADGKIIGDPMNVEFTEVCTKLGWKSKGSEWDILPLVVSANGHDPDYFDYP
PELILEVPLTHPKFEWFSDLGLRWYALPAVSSMLFDVGGIQFTATTFSGW
YMSTEIGSRNLCDTNRRNMLETVALKMQLDTRTPTSLWKDKAVVEMNIAV
LHSYQSRNVTIVDHHTASESFMKHFENESKLRNGCPADWIWIVPPLSGSI
TPVFHQEMALYYLKPSFEYQDPAWRTHVWKKGRGESKGKKPRRKFNFKQI
ARAVKFTSKLFGRALSKRIKATVLYATETGKSEQYAKQLCELLGHAFNAQ
IYCMSDYDISSIEHEALLIVVASTFGNGDPPENGELFSQELYAMRVQESS
EHGLQDSSIGSSKSFMKASSRQEFMKLPLQQVKRIDRWDSLRGSTSDTFT
EETFGPLSNVRFAVFALGSSAYPNFCAFGQYVDNILGELGGERLLRVAYG
DEMCGQEQSFRKWAPEVFKLACETFCLDPEESLSDASLALQNDSLTVNTV
RLVPSANKGSLDSSLSKYHNKKVHCCKAKAKPHNLTRLSEGAKTTMLLEI
CAPGLEYEPGDHVGIFPANRTELVDGLLNRLVGVDNPDEVLQLQLLKEKQ
TSNGIFKCWEPHDKIPPDTLRNLLARFFDLTTPPSRQLLTLLAGFCEDTA
DKERLELLVNDSSAYEDWRHWRLPHLLDVLEEFPSCRPPAPLLLAQLTPL
QPRFYSISSSPRRVSDEIHLTVAIVKYRCEDGQGDERYGVCSNYLSGLRA
DDELFMFVRSALGFHLPSDRSRPIILIGPGTGIAPFRSFWQEFQVLSDLD
PTAKLPKMWLFFGCRNRDVDLYAEEKAELQKDQILDRVFLALSREQAIPK
TYVQDLIEQEFDSLYQLIVQERGHIYVCGDVTMAEHVYQTIRKCIAGKEQ
KSEAEVETFLLTLRDESRYHEDIFGITLRTAEIHTKSRATARIRMASQPA
SFLDH
BO22364.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:02:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nos-PA | 1349 | CG6713-PA | 1..1349 | 1..1349 | 7102 | 100 | Plus |
| Nos-PK | 1098 | CG6713-PK | 1..1098 | 252..1349 | 5798 | 100 | Plus |
| Nos-PF | 756 | CG6713-PF | 1..736 | 1..736 | 3895 | 99.9 | Plus |
| Cpr-PD | 679 | CG11567-PD | 167..678 | 807..1324 | 579 | 30.8 | Plus |
| Cpr-PC | 679 | CG11567-PC | 167..678 | 807..1324 | 579 | 30.8 | Plus |
