BO22406.complete Sequence
511 bp assembled on 2009-12-07
GenBank Submission: KX795801
> BO22406.complete
GAAGTTATCAGTCGACATGGCTGAGTTGGACGATCAATTCGAGACCACGG
ATTCCGGCGCATCGACGACCTATCCCATGCAATGTTCGGCATTGCGCAAA
AACGGATTCGTCATGCTGAAGTCGCGGCCATGCAAGATTGTCGAGATGTC
TACTTCAAAGACTGGAAAGCACGGACACGCCAAGGTTCATATGGTTGGCA
TTGATATTTTCTCTAACAAGAAATATGAAGATATTTGCCCATCTACTCAT
AACATGGATGTGCCCAATGTCAAAAGGGAGGACCTTCAGTTGATTGCTAT
TAGTGACGATAGCTTCCTTACATTGATGACCGAGAGCGGAGATCTGCGTG
AAGACTTGAAGGTTCCAGAGGGCGAATTGGGTGAACAATTGCGTTTAGAT
TTTGATAGTGGCAAGGACTTACTGTGCACCGTTCTCAAGGCGTGCGGAGA
GGAGTGCGTTATCGCAATTAAAACCAATACTGCTCTGGACAAAGCAAGCT
TTCTAGACCAT
BO22406.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:05:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF-5A-RA | 480 | CG3186-PA | 1..477 | 17..493 | 2385 | 100 | Plus |
| eIF-5A-RB | 480 | CG3186-PB | 1..477 | 17..493 | 2385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:05:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF-5A-RA | 752 | CG3186-RA | 50..533 | 10..493 | 2390 | 99.6 | Plus |
| eIF-5A-RB | 747 | CG3186-RB | 108..584 | 17..493 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:05:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24058486..24058691 | 17..222 | 1030 | 100 | Plus |
| 2R | 25286936 | 2R | 24058932..24059133 | 223..424 | 1010 | 100 | Plus |
| 2R | 25286936 | 2R | 24059195..24059264 | 424..493 | 350 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:05:09 has no hits.
BO22406.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:38:29 Download gff for
BO22406.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-5A-RA | 86..562 | 17..495 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:07:49 Download gff for
BO22406.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-5A-RA | 57..533 | 17..495 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:10:40 Download gff for
BO22406.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-5A-RA | 57..533 | 17..495 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:10:40 Download gff for
BO22406.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24058486..24058691 | 17..222 | 100 | -> | Plus |
| 2R | 24058932..24059133 | 223..424 | 100 | -> | Plus |
| 2R | 24059196..24059264 | 425..495 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:07:49 Download gff for
BO22406.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19946009..19946214 | 17..222 | 100 | -> | Plus |
| arm_2R | 19946455..19946656 | 223..424 | 100 | -> | Plus |
| arm_2R | 19946719..19946787 | 425..495 | 97 | | Plus |
BO22406.pep Sequence
Translation from 16 to 511
> BO22406.pep
MAELDDQFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTG
KHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSF
LTLMTESGDLREDLKVPEGELGEQLRLDFDSGKDLLCTVLKACGEECVIA
IKTNTALDKASFLDH
BO22406.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:07:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF-5A-PA | 159 | CG3186-PA | 1..159 | 1..159 | 827 | 100 | Plus |
| eIF-5A-PB | 159 | CG3186-PB | 1..159 | 1..159 | 827 | 100 | Plus |
