BO22451.complete Sequence
2443 bp assembled on 2010-01-08
GenBank Submission: KX796530
> BO22451.complete
GAAGTTATCAGTCGACATGACGATGGCAGAAGGCACCGACCCCATGGGGC
ATGGTCACCACACGAATCCGCACAATCCGCCCCAGCAGCCGCCGCAGCAC
CATCCGCACCACCTGCCCCTGCCCCATCCCCCGCCGGCACCACCGCCGCA
GCTACTCAATTTCAATCACCACCAGCAGCAGTATCTTCCCCACATGTATC
CTGCGGCAGCGGCAGCGGCACAATCTCACTCCCACTACGGTGGCCTGCAG
TATCCCCATCCACATGCGCTGCAGCATCAGCATCATCCCCACCAGCACCA
GCATCACTTGCCGCTGGCCTTGAGCCTCCATCAGCAGGCGGCTGCGGCGG
CGGCAGTGGCTGCAGCGGTGGCCACCAACCACTCCAACAATAACAATCAG
GCCAGCGTGGCCAACAATAATATAGTGGTTCCATGGAAGCAGCGCAAGCG
CAAGAGGCTCTCAGCGGTGCTGGACAAGCTGCACCACAATAATAATAATA
ATAATAACAACAATAATGAGACCCACTCCAATGGCATGGCCTGCAAGGCG
GAACCGATGGAAATGAAGGGAGATCTAGCCGAAGATGCCGAACAGGATGA
AGATCATGATGGGTCCGTGCCTGATGAGGAAGATGATTCCGTAGATCAGG
ATGGTGATGCTGGCAAGTACATCAAGAGCGAGCAGCCCGTCAGCGAGGAC
GAGGAGAACGAACAGGAAATGGACCAAGATATCGAGGACATTTCCGGCGA
GGATCTCGAGCTGTCGCACAGCGATGATAATGACCAGGACGACAGCCCCA
GGATCAGTATGAGTCCTCTGCAGCTGCAGGCCGCCCAGAGCAATCTGCCC
CAAGATCAGAACCAGCCGATGAACAAGGAGAATCCGCTTCATGTGGACAT
CAAGACTGAGATCCCCAGCCCCTATGATAGGTATTTCCCTATACCATCTC
CTCTGTTCGGCTATTACCTGCACACCAAATATCTGAATGAGGTATTCCGC
CGGCGTCATGATCTCTATCCCTCGCCTCTGCAGCACACTCCATCTTCCAT
AGCCTCCGAAACGGAGACTTCACCCAATGCTCAGGAGCGCAAGAGTAGCT
CCAACCACGTCTTGCCCCACGCTCTGTTGGCCAATAATTCACCTCCGCCA
TCGCTGCCATCGCCACCGCGCAGCGAATCCTCGGTGACTAACAATGTGGC
CACCACCACCACTAGCAGCACCACCAAGAAGCGCAGCAGTCCCAAGCCCA
AGGGCAAGAAGGGTGAGAAGAAGCCAATGCCACCGCCGCAAGAGCGTCCC
TTGGATCTGTGCATGCGCAACGAAGTGGAGCCCAAGAAGTACAAAAAGTC
AGGCTCGAAATCCTCTCTAGAGTCCCGTTCCGCCGGTATGATGCCGCCGC
CGCCGGCTCTGAGTGCGGCCAGCAGTTTGGAGAGCATGAGTGCCCTATCA
CCGGCATCGAGTAGCCACTCGGGTCACATGCCCATCACCAGCGCTGCCAC
GCCCAACCACCAGCCACCACCCAATTCCCCCTATGCCAATGCCATGAACG
CTGCCCATGCAGCGGCAGCAGCGGCGGCGGCAGCCATGATCAAGATGGAG
ATGCCTTTGCATCCGCTGCACCACCAGCAGATGCATCACTCGCAAGTGCC
CACCACCACAGTGGGTGTGCCGGTGATCAAGGGCGATGTGGCCTCGCCCA
CAACAAAGGAAACGGTCGCCTGGCGTTACAATCTGGACGTGTCGCCCGTG
GTTGAGGAGATGCCGCCCGGTTCGGATGTGGCTTATGTATGCCCCACCTG
CGGACAGATGTTCTCGCTGCACGACCGCCTGGCCAAGCACATGGCCTCGC
GTCACAAGTCCCGCAATCCCGCCAATGATATTGCCAAAGCCTATTCCTGC
GATGTGTGCCGGCGATCCTTTGCCCGCTCCGATATGCTGACCCGCCACAT
GCGCCTCCACACCGGAGTCAAGCCGTACACGTGCAAGGTGTGCGGTCAGG
TCTTTTCCCGCTCGGATCACCTGTCCACCCACCAGAGGACCCACACCGGC
GAGAAGCCCTACAAGTGTCCGCAGTGCCCGTATGCCGCCTGTCGTCGCGA
CATGATCACCAGGCATATGCGGACACACACGCGGTACGATTCCAGGGGAG
GATCTCGAGAAGGCAGGGAAGGACGCGAAGGACGTGAGGGCAAGGAGAGC
CGCGATTCGCGCAGGAGCAACGAACGAATCGAGGAGCCCAACTCGCCCGG
TTCCCATTCGCTGCTGGACATGAAGATGAACATGAACATGGGCATGGGAA
TGGGCCTCAATATGGGCCTACCCATGAATCCGATGAGTCTACTGCAGGAG
GAACTGCTGCAGAAGTCCCAGCCGGGCCTAACCCTGGGTGGACCCATGCC
ACTGGTTGTCAAGACGGAGAGCGCCGCAAGCTTTCTAGACCAT
BO22451.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:25:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| klu-RD | 2412 | CG12296-PD | 1..2409 | 17..2425 | 12030 | 100 | Plus |
| klu-RC | 2412 | CG12296-PC | 1..2409 | 17..2425 | 12030 | 100 | Plus |
| klu-RB | 2457 | CG12296-PB | 1..2409 | 17..2425 | 12030 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:25:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| klu-RD | 4792 | CG12296-RD | 1061..3470 | 16..2425 | 12035 | 100 | Plus |
| klu-RC | 4437 | CG12296-RC | 706..3115 | 16..2425 | 12035 | 100 | Plus |
| klu-RB | 3870 | CG12296-RB | 706..3115 | 16..2425 | 12035 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:25:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10982493..10984902 | 2425..16 | 12035 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 01:25:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2346..2521 | 248..422 | 121 | 55.3 | Plus |
BO22451.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:22 Download gff for
BO22451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| klu-RA | 698..3106 | 17..2427 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:53:41 Download gff for
BO22451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| klu-RA | 707..3115 | 17..2427 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:25:19 Download gff for
BO22451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| klu-RB | 707..3115 | 17..2427 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:25:19 Download gff for
BO22451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10982491..10984901 | 17..2427 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:53:41 Download gff for
BO22451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10975591..10978001 | 17..2427 | 99 | | Minus |
BO22451.pep Sequence
Translation from 16 to 2443
> BO22451.pep
MTMAEGTDPMGHGHHTNPHNPPQQPPQHHPHHLPLPHPPPAPPPQLLNFN
HHQQQYLPHMYPAAAAAAQSHSHYGGLQYPHPHALQHQHHPHQHQHHLPL
ALSLHQQAAAAAAVAAAVATNHSNNNNQASVANNNIVVPWKQRKRKRLSA
VLDKLHHNNNNNNNNNNETHSNGMACKAEPMEMKGDLAEDAEQDEDHDGS
VPDEEDDSVDQDGDAGKYIKSEQPVSEDEENEQEMDQDIEDISGEDLELS
HSDDNDQDDSPRISMSPLQLQAAQSNLPQDQNQPMNKENPLHVDIKTEIP
SPYDRYFPIPSPLFGYYLHTKYLNEVFRRRHDLYPSPLQHTPSSIASETE
TSPNAQERKSSSNHVLPHALLANNSPPPSLPSPPRSESSVTNNVATTTTS
STTKKRSSPKPKGKKGEKKPMPPPQERPLDLCMRNEVEPKKYKKSGSKSS
LESRSAGMMPPPPALSAASSLESMSALSPASSSHSGHMPITSAATPNHQP
PPNSPYANAMNAAHAAAAAAAAAMIKMEMPLHPLHHQQMHHSQVPTTTVG
VPVIKGDVASPTTKETVAWRYNLDVSPVVEEMPPGSDVAYVCPTCGQMFS
LHDRLAKHMASRHKSRNPANDIAKAYSCDVCRRSFARSDMLTRHMRLHTG
VKPYTCKVCGQVFSRSDHLSTHQRTHTGEKPYKCPQCPYAACRRDMITRH
MRTHTRYDSRGGSREGREGREGREGKESRDSRRSNERIEEPNSPGSHSLL
DMKMNMNMGMGMGLNMGLPMNPMSLLQEELLQKSQPGLTLGGPMPLVVKT
ESAASFLDH
BO22451.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:50:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| klu-PD | 803 | CG12296-PD | 1..803 | 1..803 | 4336 | 100 | Plus |
| klu-PC | 803 | CG12296-PC | 1..803 | 1..803 | 4336 | 100 | Plus |
| klu-PB | 818 | CG12296-PB | 1..803 | 1..803 | 4336 | 100 | Plus |
| klu-PA | 803 | CG12296-PA | 1..803 | 1..803 | 4336 | 100 | Plus |
| crol-PH | 686 | CG14938-PH | 8..319 | 388..705 | 287 | 28.4 | Plus |
