Clone BO22461 Report

Search the DGRC for BO22461

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:224
Well:61
Vector:pDNR-Dual
Associated Gene/Transcriptdisp-RA
Protein status:BO22461.pep: Imported from assembly
Sequenced Size:3688

Clone Sequence Records

BO22461.complete Sequence

3688 bp assembled on 2010-01-08

GenBank Submission: KX795363

> BO22461.complete
GAAGTTATCAGTCGACATGTTGTGCTTCGACTCGGAGAGGATGAACTGGT
ACTACCACGTCCTGGCCAGGCGTCCCTACCTGGTGGTCGTCTCCATTGCT
GTCTACTGTGTCGCTTGCATCATCGTGGCCCTCGTCCTGAACAAGCTGCC
GGACTTCAGTGATCCCACCTTGGGCTTCGAAACCCGCGGCACCAAAATTG
GAGAACGACTGACGGCCTGGTACAACCTGCTGCAAGAGACTGACCACCAT
GGTGCTCTTTTCTCAAATCCATCGGATCTGTGGGAGAGGAGACGGGTAGA
GCAGGGCTATGTGGAGACGAAGCTGCATCCGAATCACAGGCGACGCAAAA
ACAAGCACAAGAACAGAAACAAGAACAAGCGACGCAAGGAACAAAATCAA
AGCAGCCACGAGCATCACGATGTGGCGCAGAAGATGATGCAGTTCAAAAA
ACGGCTGAAGGCTACTAGTTCTCCCTCTCCAAATCTCGGCTTTGACACCT
GGATCGGGGACAGTGGAGTATTTCGCGACTACGAGATTACAAACGACAGC
GCTTCCTCCTCTTTGGAACCCACGCGACGCACTGAGCAAATCGAATATGG
CCACAACACCACCTCAGTGGACGAGGAAGAGCATCAGCAGCGGGTGCAGA
CCAAGAAGAGCACTTGGCGGCTCCTAAAGCAAGCCGCCACCTTGCCCACC
GACGGTTGGGCAGACATGCATCGTCGCCAACCCATCGAGGGATTCTTTTG
CGATTCATCGCCCCGGAAGGAGTACTCTCATTTTGTGGTCCAGCGGATCG
GTCCCAACGCCACCGATTCTCTATTTGATTTGAACGGACTGCTGGCCATG
TGTCAGTTGCAGGATCAGATTACCGAAGTCCCCAGCTACCGGGCATTTTG
CGAGCCGGAGATGCTTACCACCGAGTGCTGCCGGCCATGGTCACTGCCCA
ACTACGCCGCCATGCTGGCCAACAAAAGTTCCTGTTTCGACCTTACCACG
GAGGATGTTACTTCGCTGCACACGCTGCTCTTGGGCTGCTATGAGTACTT
CCATGACCTAAAGATGGACAACCACTGCAACGAAATACCGCATTGTCGTG
CTCCTGAAGAGTGCAAGCGGCTAAATATCGTCTTTAACGTCCTGAATTTT
CTCACCGACTTTAGTTTCATCAAGTCTAATGACTCGAATGTATACCTGAA
ATACGCCATGATTTTTATACCCGTGGCGCAATCCAACCGCTTGCTGCCAC
TGTTCCACGAATGGGAAGACGTGGAGCTGATCAACGAGCTTGTGGAAGTG
GTTGCGATGGACTTGGGCCTCGAAAACGAACTCTTTAACGAGCTGCTGCT
GACGGACGTGTGGCTAGTTTCGCTGGGAGGGACATTCGTCATGGCTAGCG
TGTGGTTGTACACGGGATCGGCATTCATCACCTTGATGTCCTGCGTAGCC
ATATGCTTTTCGCTAGGACTAGCGTACTTTTTTTACGCCATCGTGCTGGA
GTTTGAGTTCTTCCCCTATATGAACCTTCTGGCCGTGGTAGTAATAATTG
GCATTGGAGCAGACGACGTATTTCTGTTTCTTAAGATCTGGCACTGTGTG
CTGACCGAGAGGTTCAGCAATCGATGTACCTTGACCACTCAGTCCCAGAG
TGCTCTTCCCACCCTGGAGAACAGTGATCACACGGAGTCACTGGAAAACA
TAATGGCGCTGACTATGCGACATGCCGCTGCCTCCATGTTCGTTACCTCA
CTTACCACCGCCGGCGCCTTTTATGCCTCCTACAGCAGCTCTATAACAGC
TATAAAGTGCTTTGGGATTTTTGCGGGAACTGTCGTGGTGACCAACTACT
TACTAATGATAACTTGGTTGCCTGCATCGGTCTCCATCATGGAACGACTA
TTTGCCACAAGGATGTCCTGCCATCATCCGATGTCAATAAAGCTGATCCA
CGCCTGCAAGAAGTCAATTAACCGATTTTGTCAGATGTTTGAGGAGTGCA
TCACGAAAAGCATCATGAACTATGCCTATCTCTGGCTGCTGATCTTTGGG
GCTCTAGGCGCGTCCAGTGCCGTCATTGTGTTCTGGTATCCAGGACTTCA
GTTGCCGGAAAAATCACACTTCCAGCTCTTTGTGTCAAAGCATCCATTTG
AGGTTTACTCCAGTCTCAAGCAGCAGTTCTGGTTCGAGAAACCATTGCAG
GCGTACGAGAACTTCAAGATGCACATGCATTTCGTCTGGGGCGTTCAAGC
GGTGGACGACGGCGACTATACGAACCCCAACTCATACGGCCACCTGCACT
ATGACAATAATTTTAACGTATCCAGCAGGCCGGCACAACTCTGGATCCTT
GATTTTTGCCAGAGTGTGCGCCAGCAACCCTTTTACAAAGAGACTCTCGG
CATGCTGTTGCCCAATTGTTTCATTGAAAATCTTATCGACTATATGAAGC
GCAGATGCATCGATGATATGGACAGTACCAGGAAAGACCGTTCACCCTGC
TGTGACGCACAGTTTCCCTTTGAGCCGCACATATTTGAGTACTGCTTGCC
ACAAAGCATATCCAACATGTATGACACTACATTTTTCCGGCCCGGCGTGG
CAGGACCCAAGTTTGCAGAGGCTCCCCGACTGGAGACTGAGGATTACCTA
GGAATGAGTGGAAATGAGAGTGCAGAGTACAGCACCAACGGATCATTTAC
ACCGCTACTAGTCAAAGCCCTGGTCATCGAGTTCGAGTCCAACGTGGCCT
ACAGCACCATCTACGCAAATATTAGGCAGTTCTACGAGTCTGTAGAGCAC
TGGTTTCAGATGCAGTTAAAAACGGCACCGCCGGAACTTCAAGGAGGATG
GTTCACGAGCGACCTGAAATTTTACAATGTGCAGGACACCCTTTCGCACG
ACACCTTTGTTGCCATTTGTCTGGCCATGGCTGCATCACTTGCAGTGCTC
CTATGCTTCACCGTAAACATATTGATTTCCATCTACGCCGTACTAACCGT
GTCGCTAAGTATTTTTAACACCGTGGCTGTGCTCATCCTGCTCGGCTGGC
AGCTTAACATCTTGGAGAGCATTGCGGTGAGCACGGCTATCGGTCTGGCT
GTGGACTTTAGCCTACATTACGGTATTCACTACCGGATGTCCCCGGTTAA
GGAGAGATTGGCAGCCACACAGTTTGTACTATCCCGCATCATTGGACCCA
CAGTGATGGCGGCCACCACAACTGGTCTAGCTGGCGGAATCATGATGGCA
TCCAACATATTGCCCTACATACAGATTGGCGTCTTCCTGGTCGTTGTCAT
GATCGTTAGCTGGTTCTATGCCACTTTCTTTCTAATGAGTCTGCTTCGGG
TTGCCGGTCCTCAGCATGGTTTTCTGGAACTCAAGTGGCCGTTGTGGAGC
AAGCGAAGCAGTGGCAGCAGCAAGTTCTACGAGCGGAAACCCAGCCAAGT
GATCGCCAGCGAGCAGCTGCTGACCCCCACAAGCTCGGCCATCGTTGAGT
TGGCGAACTCGGAGACGCACGAACTGGAGTCCCTAAACTCCAACAGCCTG
ATCAAAACCATTTCGGGCATCGAAAGCGCCCACGCATTGTCCTCGCTGCC
GAGGGACTTCGAGCACTCATTCCAGACGATGCACGAGTGCAAATATCAAA
CGTATCCGTCTACATCCAATGCAAGCTTTCTAGACCAT

BO22461.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:49:24
Subject Length Description Subject Range Query Range Score Percent Strand
disp-RA 3657 CG2019-PA 1..3654 17..3670 18270 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:49:25
Subject Length Description Subject Range Query Range Score Percent Strand
disp-RA 4884 CG2019-RA 401..4057 14..3670 18285 100 Plus
CG34287-RA 951 CG34287-RA 789..881 1273..1181 465 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:49:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5854343..5855352 1181..172 5050 100 Minus
3R 32079331 3R 5850890..5851874 3436..2452 4925 100 Minus
3R 32079331 3R 5852056..5852699 2454..1811 3205 99.8 Minus
3R 32079331 3R 5852766..5853309 1816..1273 2720 100 Minus
3R 32079331 3R 5850524..5850759 3670..3435 1180 100 Minus
3R 32079331 3R 5855752..5855911 173..14 800 100 Minus
3R 32079331 3R 5854120..5854212 1273..1181 465 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:49:23 has no hits.

BO22461.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:26 Download gff for BO22461.complete
Subject Subject Range Query Range Percent Splice Strand
disp-RA 409..4057 22..3672 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:08 Download gff for BO22461.complete
Subject Subject Range Query Range Percent Splice Strand
disp-RA 409..4057 22..3672 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:43 Download gff for BO22461.complete
Subject Subject Range Query Range Percent Splice Strand
disp-RA 409..4057 22..3672 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:43 Download gff for BO22461.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5850521..5850758 3436..3672 99 <- Minus
3R 5850891..5851871 2455..3435 100 <- Minus
3R 5852056..5852694 1816..2454 100 <- Minus
3R 5852767..5853309 1273..1815 100 <- Minus
3R 5854121..5854212 1181..1272 100 <- Minus
3R 5854344..5855351 173..1180 100 <- Minus
3R 5855753..5855903 22..172 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:08 Download gff for BO22461.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1676243..1676480 3436..3672 99 <- Minus
arm_3R 1676613..1677593 2455..3435 100 <- Minus
arm_3R 1677778..1678416 1816..2454 100 <- Minus
arm_3R 1678489..1679031 1273..1815 100 <- Minus
arm_3R 1679843..1679934 1181..1272 100 <- Minus
arm_3R 1680066..1681073 173..1180 100 <- Minus
arm_3R 1681475..1681625 22..172 100   Minus

BO22461.pep Sequence

Translation from 16 to 3688

> BO22461.pep
MLCFDSERMNWYYHVLARRPYLVVVSIAVYCVACIIVALVLNKLPDFSDP
TLGFETRGTKIGERLTAWYNLLQETDHHGALFSNPSDLWERRRVEQGYVE
TKLHPNHRRRKNKHKNRNKNKRRKEQNQSSHEHHDVAQKMMQFKKRLKAT
SSPSPNLGFDTWIGDSGVFRDYEITNDSASSSLEPTRRTEQIEYGHNTTS
VDEEEHQQRVQTKKSTWRLLKQAATLPTDGWADMHRRQPIEGFFCDSSPR
KEYSHFVVQRIGPNATDSLFDLNGLLAMCQLQDQITEVPSYRAFCEPEML
TTECCRPWSLPNYAAMLANKSSCFDLTTEDVTSLHTLLLGCYEYFHDLKM
DNHCNEIPHCRAPEECKRLNIVFNVLNFLTDFSFIKSNDSNVYLKYAMIF
IPVAQSNRLLPLFHEWEDVELINELVEVVAMDLGLENELFNELLLTDVWL
VSLGGTFVMASVWLYTGSAFITLMSCVAICFSLGLAYFFYAIVLEFEFFP
YMNLLAVVVIIGIGADDVFLFLKIWHCVLTERFSNRCTLTTQSQSALPTL
ENSDHTESLENIMALTMRHAAASMFVTSLTTAGAFYASYSSSITAIKCFG
IFAGTVVVTNYLLMITWLPASVSIMERLFATRMSCHHPMSIKLIHACKKS
INRFCQMFEECITKSIMNYAYLWLLIFGALGASSAVIVFWYPGLQLPEKS
HFQLFVSKHPFEVYSSLKQQFWFEKPLQAYENFKMHMHFVWGVQAVDDGD
YTNPNSYGHLHYDNNFNVSSRPAQLWILDFCQSVRQQPFYKETLGMLLPN
CFIENLIDYMKRRCIDDMDSTRKDRSPCCDAQFPFEPHIFEYCLPQSISN
MYDTTFFRPGVAGPKFAEAPRLETEDYLGMSGNESAEYSTNGSFTPLLVK
ALVIEFESNVAYSTIYANIRQFYESVEHWFQMQLKTAPPELQGGWFTSDL
KFYNVQDTLSHDTFVAICLAMAASLAVLLCFTVNILISIYAVLTVSLSIF
NTVAVLILLGWQLNILESIAVSTAIGLAVDFSLHYGIHYRMSPVKERLAA
TQFVLSRIIGPTVMAATTTGLAGGIMMASNILPYIQIGVFLVVVMIVSWF
YATFFLMSLLRVAGPQHGFLELKWPLWSKRSSGSSKFYERKPSQVIASEQ
LLTPTSSAIVELANSETHELESLNSNSLIKTISGIESAHALSSLPRDFEH
SFQTMHECKYQTYPSTSNASFLDH

BO22461.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:04:17
Subject Length Description Subject Range Query Range Score Percent Strand
disp-PA 1218 CG2019-PA 1..1218 1..1218 6439 100 Plus