BO22509.complete Sequence
1153 bp assembled on 2010-01-12
GenBank Submission: KX794657
> BO22509.complete
GAAGTTATCAGTCGACATGAGTATGTCGCGCGGCGGCAACACAACTCTGG
ACTTGCAGCCGCTCCTGGCGGAGAGCGATGTCGGAAACAGGGAGCTGGAG
GAGAAGATGGGCGGATCGGCGGATCGGTCATCGCTGCTCGATGGATCCGG
TTCGAAGGAGCTGAGTCACCGGGAACGCGAGGACTCGGCGTTGTTCGTCA
AGAAGATCGGGAGCGCCTTGTTCTATGGCTTGTCCTCCTTCATGATTACG
GTGGTAAACAAGACGGTGCTTACCTCCTACCACTTCCCCTCGTTCCTGTT
CCTCAGCCTCGGGCAACTTACTGCTAGCATTGTGGTCCTGGGCATGGGCA
AGCGCCTGAAATTGGTGAACTTTCCCCCTCTGCAGAGGAATACCTTCGCC
AAGATCTTTCCGCTGCCACTGATATTTCTGGGAAACATGATGTTTGGACT
GGGTGGCACAAAAACCTTGAGTCTGCCCATGTTCGCAGCCCTACGACGCT
TCTCTATCCTGATGACCATGCTGCTGGAGCTCAAGATCCTGGGACTGCGA
CCTTCGAATGCGGTTCAGGTCAGCGTATACGCAATGATCGGTGGAGCGCT
GCTGGCCGCCTCTGATGATCTGTCCTTCAACATGAGGGGCTACATCTATG
TGATGATCACTAACGCCTTGACCGCCTCGAATGGCGTATATGTGAAGAAA
AAACTCGACACCTCGGAGATCGGAAAGTACGGCCTAATGTACTACAACTC
GCTGTTTATGTTTCTGCCTGCCCTGGCCCTCAACTATGTTACAGGGAATC
TAGATCAGGCGCTGAACTTTGAACAATGGAATGACTCAGTGTTTGTGGTG
CAGTTCCTGCTCAGTTGCGTTATGGGTTTCATCCTATCGTACAGCACCAT
CCTGTGCACGCAATTCAACTCGGCGCTGACCACCACCATTGTGGGATGCC
TGAAAAACATCTGCGTAACATATCTGGGCATGTTCATTGGAGGCGACTAC
GTCTTCTCGTGGCTCAACTGTATTGGGATCAACATCAGCGTGCTGGCTAG
TCTGCTCTACACGTACGTCACTTTTCGGCGGAAGCGGGCTCCCGATAAGC
AGGACCACTTGCCCAGCACCCGCGGCGAGAATGTCGCAAGCTTTCTAGAC
CAT
BO22509.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:50:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| frc-RB | 1122 | CG3874-PB | 1..1119 | 17..1135 | 5595 | 100 | Plus |
| frc-RA | 1122 | CG3874-PA | 1..1119 | 17..1135 | 5595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32174-RC | 3871 | CG32174-RC | 216..1334 | 17..1135 | 5595 | 100 | Plus |
| frc-RB | 3871 | CG3874-RB | 216..1334 | 17..1135 | 5595 | 100 | Plus |
| frc-RA | 1609 | CG3874-RA | 216..1334 | 17..1135 | 5595 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17431857..17432975 | 1135..17 | 5595 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:50:47 has no hits.
BO22509.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:19 Download gff for
BO22509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32174-RC | 211..1329 | 17..1137 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:36:02 Download gff for
BO22509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| frc-RA | 216..1334 | 17..1137 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:11:22 Download gff for
BO22509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| frc-RA | 216..1334 | 17..1137 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:11:22 Download gff for
BO22509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17431853..17432975 | 17..1137 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:36:02 Download gff for
BO22509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17424953..17426075 | 17..1137 | 99 | | Minus |
BO22509.pep Sequence
Translation from 16 to 1153
> BO22509.pep
MSMSRGGNTTLDLQPLLAESDVGNRELEEKMGGSADRSSLLDGSGSKELS
HREREDSALFVKKIGSALFYGLSSFMITVVNKTVLTSYHFPSFLFLSLGQ
LTASIVVLGMGKRLKLVNFPPLQRNTFAKIFPLPLIFLGNMMFGLGGTKT
LSLPMFAALRRFSILMTMLLELKILGLRPSNAVQVSVYAMIGGALLAASD
DLSFNMRGYIYVMITNALTASNGVYVKKKLDTSEIGKYGLMYYNSLFMFL
PALALNYVTGNLDQALNFEQWNDSVFVVQFLLSCVMGFILSYSTILCTQF
NSALTTTIVGCLKNICVTYLGMFIGGDYVFSWLNCIGINISVLASLLYTY
VTFRRKRAPDKQDHLPSTRGENVASFLDH
BO22509.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:42:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| frc-PB | 373 | CG3874-PB | 1..373 | 1..373 | 1889 | 100 | Plus |
| frc-PA | 373 | CG3874-PA | 1..373 | 1..373 | 1889 | 100 | Plus |
| nac-PA | 337 | CG9620-PA | 25..288 | 70..320 | 172 | 26.3 | Plus |
