BO22712.complete Sequence
406 bp assembled on 2010-01-15
GenBank Submission: KX799281
> BO22712.complete
GAAGTTATCAGTCGACATGAAATTAGTAAGATTCCTTATGAAGCTAAGTC
ACGAGACCGTGACCATCGAACTGAAGAACGGCACCCAGATCCACGGCACC
ATTACCGGCGTGGATGTGGCCATGAACACTCACCTGAAGAGCGTTCGGAT
GACGATCAAGAACCGGGATCCCGTCCACCTGGAGACGCTGAGCATTCGCG
GCAACAACATCAGATACTTTATACTGCCGGACAGCCTGCCGCTGGAGACG
CTCCTCATCGACGACACCCCGAAGTCGAAGACAAAAAAGAAGGACAGCGG
CCGCGTGGGAAATCGCGGCAGGGGCAGAGGCGCCCGCGGACGAGGTGGTC
CACGGGGTCGCGGAAGGGGCCGAGCTTCAGGCCGACGTGCAAGCTTTCTA
GACCAT
BO22712.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:16:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SmD1-RA | 375 | CG10753-PA | 1..372 | 17..388 | 1860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SmD1-RA | 729 | CG10753-RA | 94..467 | 15..388 | 1870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12733626..12733985 | 388..29 | 1800 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:16:50 has no hits.
BO22712.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:58 Download gff for
BO22712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
snRNP69D-RA | 93..464 | 17..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:50 Download gff for
BO22712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmD1-RA | 96..467 | 17..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:46:45 Download gff for
BO22712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmD1-RA | 96..467 | 17..390 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:46:45 Download gff for
BO22712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12733624..12733983 | 31..390 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:50 Download gff for
BO22712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12726724..12727083 | 31..390 | 99 | <- | Minus |
BO22712.pep Sequence
Translation from 16 to 406
> BO22712.pep
MKLVRFLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNR
DPVHLETLSIRGNNIRYFILPDSLPLETLLIDDTPKSKTKKKDSGRVGNR
GRGRGARGRGGPRGRGRGRASGRRASFLDH
BO22712.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:01:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SmD1-PA | 124 | CG10753-PA | 1..124 | 1..124 | 637 | 100 | Plus |
SmD3-PA | 151 | CG8427-PA | 7..121 | 8..118 | 139 | 32.5 | Plus |