BO22725.complete Sequence
886 bp assembled on 2010-01-15
GenBank Submission: KX799339
> BO22725.complete
GAAGTTATCAGTCGACATGAGTTCCGCGGTCAGCGAGTCCAAGCTCAAGG
AGTACTACGATGTGGCCCTGAAACTGGTCCTCAAGTGCGGGCCTCTGATG
CAGGAGGGCTATCAGAAGGCAAAGACGGAATACAAGGTCAAGGCGGACTT
CTACGACCTGGTGACCGTGTACGATAAGCAAATCGAGGATATTTTGACCG
AGGGATTGGTGGCCGCCTTTCCCGAATCCCTGATCATTGGCGAGGAGGAG
TCGGCAGTTTCACAGCGCCAGGCGGAGCTGACTGATGCACCCACGTGGAT
CATAGATCCCATCGACGGCACCACAAACTTCATTCACCGCATCCCGCACT
GCTGCATCTCCGTGGGCCTGGCCATCAACAAGGAGCTGGTCGTGGGCATT
ATCTACAATCCACCGGCGAATGAACTATTCTCCGCCTACAAGGGACACGG
AGCCTATCTGAATGGCGAACCCATCCACACATCCAAAGTGACGACGATCA
AGCAAGCAGTGATTGCCTACGAGATCTCCCTGATCCACGCCGCCGGAGTG
AGGGACAAGAATGTGAAGCGACTGTACAAGATGGCCTCGAATGCCACGGG
AACCAGGTGTTTCGGAAGTGCCGCCCTGACCCTGTGCTACGTGGCCACGG
GCCAGTGCGATGCCTATCATGTGGAGGATCTGAAACCGTGGGACATTGCT
GCCGGAGCCATCATTCTGACCGAAGCTGGCGGCACTGTGTGCCATACCAG
CGGATCCAAATTCGATGTGATGAAACCGGATTGCGTGTGCGCCGCCACGC
CGGAGTTGGCCAAGAATGTGATTAGTCTTATCGAAGAGGCCGGTCAGATT
ACAGAGTACACATTTAAGGCAAGCTTTCTAGACCAT
BO22725.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:16:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17029-RB | 855 | CG17029-PB | 1..852 | 17..868 | 4260 | 100 | Plus |
| CG17029-RA | 855 | CG17029-PA | 1..852 | 17..868 | 4260 | 100 | Plus |
| CG17028-RB | 855 | CG17028-PB | 259..774 | 275..790 | 480 | 72.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17029-RB | 1167 | CG17029-RB | 207..1058 | 17..868 | 4260 | 100 | Plus |
| CG17029-RA | 1004 | CG17029-RA | 44..895 | 17..868 | 4260 | 100 | Plus |
| CG17028-RB | 893 | CG17028-RB | 278..793 | 275..790 | 480 | 72.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15977076..15977555 | 17..496 | 2400 | 100 | Plus |
| 3L | 28110227 | 3L | 15977954..15978326 | 496..868 | 1865 | 100 | Plus |
| 3L | 28110227 | 3L | 15978801..15978949 | 275..423 | 295 | 79.9 | Plus |
| 3L | 28110227 | 3L | 21267397..21267491 | 370..276 | 190 | 80 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:16:25 has no hits.
BO22725.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:12 Download gff for
BO22725.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17029-RA | 42..893 | 17..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:39 Download gff for
BO22725.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17029-RA | 44..895 | 17..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:46:35 Download gff for
BO22725.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17029-RA | 44..895 | 17..870 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:46:35 Download gff for
BO22725.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15977076..15977555 | 17..496 | 100 | -> | Plus |
| 3L | 15977955..15978326 | 497..870 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:39 Download gff for
BO22725.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15970176..15970655 | 17..496 | 100 | -> | Plus |
| arm_3L | 15971055..15971426 | 497..870 | 99 | | Plus |
BO22725.pep Sequence
Translation from 16 to 886
> BO22725.pep
MSSAVSESKLKEYYDVALKLVLKCGPLMQEGYQKAKTEYKVKADFYDLVT
VYDKQIEDILTEGLVAAFPESLIIGEEESAVSQRQAELTDAPTWIIDPID
GTTNFIHRIPHCCISVGLAINKELVVGIIYNPPANELFSAYKGHGAYLNG
EPIHTSKVTTIKQAVIAYEISLIHAAGVRDKNVKRLYKMASNATGTRCFG
SAALTLCYVATGQCDAYHVEDLKPWDIAAGAIILTEAGGTVCHTSGSKFD
VMKPDCVCAATPELAKNVISLIEEAGQITEYTFKASFLDH
BO22725.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:09:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17029-PB | 284 | CG17029-PB | 1..284 | 1..284 | 1473 | 100 | Plus |
| CG17029-PA | 284 | CG17029-PA | 1..284 | 1..284 | 1473 | 100 | Plus |
| CG17028-PB | 284 | CG17028-PB | 1..284 | 1..284 | 1054 | 69.4 | Plus |
| CG17028-PA | 284 | CG17028-PA | 1..284 | 1..284 | 1054 | 69.4 | Plus |
| CG17027-PB | 288 | CG17027-PB | 2..277 | 3..277 | 713 | 46.7 | Plus |
