Clone BO22738 Report

Search the DGRC for BO22738

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:227
Well:38
Vector:pDNR-Dual
Associated Gene/Transcriptrev7-RA
Protein status:BO22738.pep: Imported from assembly
Sequenced Size:628

Clone Sequence Records

BO22738.complete Sequence

628 bp assembled on 2010-01-15

GenBank Submission: KX796147

> BO22738.complete
GAAGTTATCAGTCGACATGCAGGCGGAGATTAAGGCCGACATCATCGTGG
AGGCGATGGAGGTGCTAGTGAATCACATTCTATACGTGCGCGGTATATAC
CCCTCGCACATTTTTAAAATGAAGCGGATGTACAACTCGCCCATCTATGT
GTCCATATTTCCACCGCTTAATAACTACCTGGCCGGCGTCCTAAAATCCG
CACAAGAACTTCTTCGCCGCCGGGAGCTGCAGTGCCTGGAGCTAATAGTG
TATCAGAAGGAGAATGAGAAGTTGGAGAGCTATAAAATGCAACTAGAAAC
CCAGAGGAGTGGCCTACCGGCAGAGGATCATTTGATGGAGTTCGAGCAGA
ACATGCGCTCTGTCATCTACAAAATCTCTCAGCGCTTAAACCAGGCGCCT
AAACTGCCCGCCGGAAGTTGTCAGTTTAAGGTGCATCTGCACACTACCCA
GGAGGCATTCATCCGCTTCAGCCATGACTCCCAGTACCAGGAGTTTCCCT
GGCTTCAGACCCAAAAAACTGAATCCCAAGCGACAGGGCGAACCGTTTAC
CTCCTTCCTTTGGCTAGGGTAGATGATTTGGGACTGAAAATGGATGTCCT
CATCGTTAATGCAAGCTTTCTAGACCAT

BO22738.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:16:21
Subject Length Description Subject Range Query Range Score Percent Strand
rev7-RA 597 CG2948-PA 1..594 17..610 2970 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:23
Subject Length Description Subject Range Query Range Score Percent Strand
rev7-RA 831 CG2948-RA 67..664 13..610 2975 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5588939..5589536 13..610 2975 99.8 Plus
Blast to na_te.dros performed on 2014-11-28 03:16:20 has no hits.

BO22738.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:11 Download gff for BO22738.complete
Subject Subject Range Query Range Percent Splice Strand
rev7-RA 1..594 17..612 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:37 Download gff for BO22738.complete
Subject Subject Range Query Range Percent Splice Strand
rev7-RA 71..664 17..612 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:46:34 Download gff for BO22738.complete
Subject Subject Range Query Range Percent Splice Strand
rev7-RA 71..664 17..612 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:46:34 Download gff for BO22738.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5588943..5589536 17..612 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:37 Download gff for BO22738.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1414665..1415258 17..612 99   Plus

BO22738.pep Sequence

Translation from 16 to 628

> BO22738.pep
MQAEIKADIIVEAMEVLVNHILYVRGIYPSHIFKMKRMYNSPIYVSIFPP
LNNYLAGVLKSAQELLRRRELQCLELIVYQKENEKLESYKMQLETQRSGL
PAEDHLMEFEQNMRSVIYKISQRLNQAPKLPAGSCQFKVHLHTTQEAFIR
FSHDSQYQEFPWLQTQKTESQATGRTVYLLPLARVDDLGLKMDVLIVNAS
FLDH

BO22738.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:09:45
Subject Length Description Subject Range Query Range Score Percent Strand
rev7-PA 198 CG2948-PA 1..198 1..198 1014 100 Plus