BO22744.complete Sequence
793 bp assembled on 2010-01-15
GenBank Submission: KX797733
> BO22744.complete
GAAGTTATCAGTCGACATGATACCCTATAATTATAATAGTCCAGACACTG
CCAAATACGTGAAACGCACCTGGGGAAAACACTGCAATGTTTTGCTATTT
GTGAGTGGGGATATCGATGGCGAGTTGGAACCCTATGTGCCTGTGATTAA
TTCCACGGATACATGGACTTTGGTCCAACAGGGGCTAATGCAGGCCTATC
TGTTCTATGCCGACCAAATCGATTGGTTCCTTAGAGTCGAGCCCTCTAGT
TTTGTAGTTTTGGAGAATCTCCGGTATATGATACACAAAAGGAAATATCA
ACCCAGTCAACCGATATATTTTGGCTACGAGCTCGAGAATATTGTTACCC
ATGAGTCCTTTGTCCACCATCATAGTGGGTATGTCATAAGTCGCGAGGCC
TTAAGAAGGTATACGATGGCGTCGAAGGATCCTGAGAACAAGGAGTGCAC
TCATTGGGAGGGATATGTTGAGGGTCTGGATATACATCGGTGCTTGAGAT
TTGCTAATGTAACGGTAGCAGAAAGTCGGGACGAATTTGAGCACGAGACA
TTCCTACCCGTTACAATGGATTACCAGTTCTTAAATGGCTATGATACTAT
ACCCTGGCTGCGTAAATTAAGTTATCACAAACGTACAGAGAAAACAGTTC
CCATATCCAGCCGCGCCATTTGTTTTCTGGTAGAATATCCGCCAGAAATG
TACGATTACTACTATTTTGTTTATCGATTGAAAATCTTTGGCACTCCCGT
CCGAAACTCCATAGACTTTAGGCCGGCAAGCTTTCTAGACCAT
BO22744.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:38:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34451-RC | 762 | CG34451-PC | 1..759 | 17..775 | 3795 | 100 | Plus |
| CG34451-RA | 762 | CG34451-PA | 1..759 | 17..775 | 3795 | 100 | Plus |
| CG34451-RB | 501 | CG34451-PB | 1..498 | 278..775 | 2490 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:38:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34451-RC | 1172 | CG34451-RC | 153..912 | 16..775 | 3800 | 100 | Plus |
| CG34451-RA | 945 | CG34451-RA | 153..912 | 16..775 | 3800 | 100 | Plus |
| CG34451-RB | 1254 | CG34451-RB | 696..1221 | 250..775 | 2630 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:38:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15688975..15689261 | 640..354 | 1435 | 100 | Minus |
| 3L | 28110227 | 3L | 15691662..15691895 | 249..16 | 1170 | 100 | Minus |
| 3L | 28110227 | 3L | 15688777..15688913 | 775..639 | 685 | 100 | Minus |
| 3L | 28110227 | 3L | 15689343..15689450 | 355..248 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:38:09 has no hits.
BO22744.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:02 Download gff for
BO22744.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34451-RA | 154..912 | 17..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:32:55 Download gff for
BO22744.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34451-RA | 154..912 | 17..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:23:41 Download gff for
BO22744.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34451-RA | 154..912 | 17..777 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:23:41 Download gff for
BO22744.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15688775..15688911 | 641..777 | 98 | <- | Minus |
| 3L | 15688975..15689259 | 356..640 | 100 | <- | Minus |
| 3L | 15689343..15689448 | 250..355 | 100 | <- | Minus |
| 3L | 15691662..15691894 | 17..249 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:32:55 Download gff for
BO22744.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15681875..15682011 | 641..777 | 98 | <- | Minus |
| arm_3L | 15682075..15682359 | 356..640 | 100 | <- | Minus |
| arm_3L | 15682443..15682548 | 250..355 | 100 | <- | Minus |
| arm_3L | 15684762..15684994 | 17..249 | 100 | | Minus |
BO22744.pep Sequence
Translation from 16 to 793
> BO22744.pep
MIPYNYNSPDTAKYVKRTWGKHCNVLLFVSGDIDGELEPYVPVINSTDTW
TLVQQGLMQAYLFYADQIDWFLRVEPSSFVVLENLRYMIHKRKYQPSQPI
YFGYELENIVTHESFVHHHSGYVISREALRRYTMASKDPENKECTHWEGY
VEGLDIHRCLRFANVTVAESRDEFEHETFLPVTMDYQFLNGYDTIPWLRK
LSYHKRTEKTVPISSRAICFLVEYPPEMYDYYYFVYRLKIFGTPVRNSID
FRPASFLDH
BO22744.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:11:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34451-PC | 253 | CG34451-PC | 1..253 | 1..253 | 1386 | 100 | Plus |
| CG34451-PA | 253 | CG34451-PA | 1..253 | 1..253 | 1386 | 100 | Plus |
| CG34451-PB | 166 | CG34451-PB | 1..166 | 88..253 | 913 | 100 | Plus |
| CG34452-PC | 318 | CG34452-PC | 61..302 | 4..245 | 368 | 35 | Plus |
| CG34452-PB | 318 | CG34452-PB | 61..302 | 4..245 | 368 | 35 | Plus |
