BO22745.complete Sequence
1030 bp assembled on 2010-01-15
GenBank Submission: KX798185
> BO22745.complete
GAAGTTATCAGTCGACATGGCCGCCATTAAGGACAGTCTGTTGGCCCAGG
TTGCTGAGGTCCTGCCCAGCTCCGGGCACAAGGTCACCATTGTGGGCATC
GGCCAGGTGGGCATGGCCAGCGCCTTCAGCATCCTGGCTCAGAACGTCTC
CAAGGAGGTGTGCCTCATCGATGTCTGCGCGGACAAGCTGCAGGGCGAGC
TGATGGATCTGCAGCACGGCTCCAACTTTCTGAAGAACCCCCAGATCACG
GCCAGCACCGACTTTGCCGCCTCGGCCAACTCCCGTCTGTGCATCGTGAC
CGCCGGAGTGCGCCAAAAGGAGGGCGAGTCCCGCCTGTCCCTCGTGCAGC
GCAACACCGACATCCTCAAGAACATCATCCCCAAGCTGGTAGAGTACAGT
CCCGATACCATTTTGCTTATGGTGTCCAATCCCGTGGACATCATGACCTA
CGTGGCCTGGAAGCTGTCCGGTCTGCCCAAGAACCGCGTGATCGGCAGCG
GCACCAACTTGGACTCGTCCCGCTTCCGCTTCCTGATGTCGCAGCGCCTG
GGCGTGGCACCCACCTCCTGCCACGGCTGGATCATCGGTGAGCACGGCGA
CAGCTCCGTGCCCGTTTGGTCTGGAGTGAACATTGCCGGCGTGCGTTTGC
GCGAGCTGAACCCCATTCTGGGCACCGGCGAGGATCCAGAGAAGTGGAAC
GAGCTGCACAAGCAGGTGGTGGACTCCGCCTACGAGGTGATCAAGCTAAA
GGGATACACCTCCTGGGCCATTGGCCTGAGCACCGCCTCCCTGGCCTCGG
CCATCTTGCGCAACACGAGCAGCGTGGCCGCCGTCTCCACCTCCGTTTTG
GGCGAACATGGCATTGACAAGGATGTGTTCCTCTCGCTGCCCTGCGTTCT
CAATGCCAACGGTGTGACATCCGTGGTCAAGCAGATCCTGACTCCCACCG
AAGTTGAACAACTGCAGAAGTCCGCCAACATCATGTCCGATGTCCAGGCT
GGTCTGAAGTTCGCAAGCTTTCTAGACCAT
BO22745.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:40:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL3-RD | 999 | CG10160-PD | 1..996 | 17..1012 | 4980 | 100 | Plus |
| ImpL3-RC | 999 | CG10160-PC | 1..996 | 17..1012 | 4980 | 100 | Plus |
| ImpL3-RB | 999 | CG10160-PB | 1..996 | 17..1012 | 4980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:40:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL3-RD | 1350 | CG10160-RD | 98..1093 | 17..1012 | 4980 | 100 | Plus |
| ImpL3-RC | 1324 | CG10160-RC | 72..1067 | 17..1012 | 4980 | 100 | Plus |
| ImpL3-RB | 1778 | CG10160-RB | 139..1134 | 17..1012 | 4980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:40:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6259980..6260438 | 851..393 | 2295 | 100 | Minus |
| 3L | 28110227 | 3L | 6260505..6260882 | 394..17 | 1890 | 100 | Minus |
| 3L | 28110227 | 3L | 6259749..6259911 | 1012..850 | 815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:40:47 has no hits.
BO22745.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:01 Download gff for
BO22745.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL3-RA | 138..1133 | 17..1014 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:53 Download gff for
BO22745.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL3-RB | 139..1134 | 17..1014 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:33:58 Download gff for
BO22745.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL3-RB | 139..1134 | 17..1014 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:33:58 Download gff for
BO22745.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6259747..6259910 | 851..1014 | 98 | <- | Minus |
| 3L | 6259981..6260436 | 395..850 | 100 | <- | Minus |
| 3L | 6260505..6260882 | 17..394 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:53 Download gff for
BO22745.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6252847..6253010 | 851..1014 | 98 | <- | Minus |
| arm_3L | 6253081..6253536 | 395..850 | 100 | <- | Minus |
| arm_3L | 6253605..6253982 | 17..394 | 100 | | Minus |
BO22745.pep Sequence
Translation from 16 to 1030
> BO22745.pep
MAAIKDSLLAQVAEVLPSSGHKVTIVGIGQVGMASAFSILAQNVSKEVCL
IDVCADKLQGELMDLQHGSNFLKNPQITASTDFAASANSRLCIVTAGVRQ
KEGESRLSLVQRNTDILKNIIPKLVEYSPDTILLMVSNPVDIMTYVAWKL
SGLPKNRVIGSGTNLDSSRFRFLMSQRLGVAPTSCHGWIIGEHGDSSVPV
WSGVNIAGVRLRELNPILGTGEDPEKWNELHKQVVDSAYEVIKLKGYTSW
AIGLSTASLASAILRNTSSVAAVSTSVLGEHGIDKDVFLSLPCVLNANGV
TSVVKQILTPTEVEQLQKSANIMSDVQAGLKFASFLDH
BO22745.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:13:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL3-PD | 332 | CG10160-PD | 1..332 | 1..332 | 1668 | 100 | Plus |
| ImpL3-PC | 332 | CG10160-PC | 1..332 | 1..332 | 1668 | 100 | Plus |
| ImpL3-PB | 332 | CG10160-PB | 1..332 | 1..332 | 1668 | 100 | Plus |
| ImpL3-PA | 332 | CG10160-PA | 1..332 | 1..332 | 1668 | 100 | Plus |
| CG13334-PB | 361 | CG13334-PB | 50..359 | 22..330 | 657 | 41 | Plus |
