BO22754.complete Sequence
922 bp assembled on 2010-01-15
GenBank Submission: KX794760
> BO22754.complete
GAAGTTATCAGTCGACATGTCCACGCCCACTTCCCCGAAGACGCCCACAC
CGCCCACTTTGCCACCGGGCGTGACCAAAACATGTCACATTGTGAAAAGG
CCCGATTTCGATGGCTATGGTTTCAATTTGCATTCGGAGAAGGTGAAACC
AGGACAGTTTATTGGCAAAGTAGATGCGGATTCTCCGGCAGAGGCAGCCG
GCCTGAAGGAGGGCGATCGCATCCTGGAGGTCAACGGGGTGTCCATTGGC
AGCGAGACCCACAAGCAGGTGGTTGCCAGGATCAAGGCCATTGCGAATGA
AGTCCGCTTGCTGCTCATCGATGTGGATGGCAAGGCCTTGGAGGTGAAAC
CGGCATCTCCGCCAGCCGCTGCGTGCAATGGAAACGGTAGTGCCAGTCAG
AATGGATACGAGGGCACCAAACAGGAGATGCCCGGAGCAAGTGCCAATAT
CAGTAGCATCAGTATGGTGAGCACCAAGCGATCCTCAAATGCCAGCAGCA
TTCAGAGCGGCAGTACCATGAATGCCTCCGATTTGGATGTGGTCGATAGG
GGAATACCGGCAGTCGCTGCTCCGGTGGCTATCACCCCGCCTCCCGTTCA
AAATGGAAGTAAACCCTCATCGCCGATTAATAATAACACTTTGATGAGCA
CACCGCCACCGCCGTCCGCTACTAAGGCTGGCATCAACAACAATGGCAGT
GTTTATAACACCAATGGAAATGGTACAAATGGCATGACCACACCCACTAC
ACCACCCCCACCGACCAGTGGCTATAAGGCGGGCACCTTGCATTTACCAA
TGACGGCCGCCGAAATGCGCGCCAAATTGGCATCCAAGAAGAAGTACGAT
CCCAAGAACGAGAGTGTGGACCTCAAGAAGAAGTTCGACATCATTCAGAA
GCTCGCAAGCTTTCTAGACCAT
BO22754.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:41:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sip1-RA | 891 | CG10939-PA | 1..888 | 17..904 | 4440 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:41:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sip1-RA | 1717 | CG10939-RA | 436..1330 | 10..904 | 4445 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:41:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17403890..17404784 | 10..904 | 4445 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:41:09 has no hits.
BO22754.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:00 Download gff for
BO22754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sip1-RA | 440..1327 | 17..906 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:25:01 Download gff for
BO22754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sip1-RA | 443..1330 | 17..906 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:34:03 Download gff for
BO22754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sip1-RA | 443..1330 | 17..906 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:34:03 Download gff for
BO22754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17403897..17404784 | 17..906 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:25:01 Download gff for
BO22754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13291402..13292289 | 17..906 | 99 | | Plus |
BO22754.pep Sequence
Translation from 16 to 922
> BO22754.pep
MSTPTSPKTPTPPTLPPGVTKTCHIVKRPDFDGYGFNLHSEKVKPGQFIG
KVDADSPAEAAGLKEGDRILEVNGVSIGSETHKQVVARIKAIANEVRLLL
IDVDGKALEVKPASPPAAACNGNGSASQNGYEGTKQEMPGASANISSISM
VSTKRSSNASSIQSGSTMNASDLDVVDRGIPAVAAPVAITPPPVQNGSKP
SSPINNNTLMSTPPPPSATKAGINNNGSVYNTNGNGTNGMTTPTTPPPPT
SGYKAGTLHLPMTAAEMRAKLASKKKYDPKNESVDLKKKFDIIQKLASFL
DH
BO22754.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:11:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sip1-PA | 296 | CG10939-PA | 1..296 | 1..296 | 1529 | 100 | Plus |