Clone BO22836 Report

Search the DGRC for BO22836

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:228
Well:36
Vector:pDNR-Dual
Associated Gene/TranscriptCG14507-RC
Protein status:BO22836.pep: Imported from assembly
Sequenced Size:1153

Clone Sequence Records

BO22836.complete Sequence

1153 bp assembled on 2010-01-15

GenBank Submission: KX795181

> BO22836.complete
GAAGTTATCAGTCGACATGTTGTGGATAATGGGGCTAGTAGTGGCCGCTG
TGCGGCTCAATGGACAGGCGAGCGGTGCGGCAAATGTCACGGTAATCGAA
GACATTAGGAGCGCCTTCAGAGGCGTCACCAACGACACGGAGCTGCTGAA
TCACATAATACCGGAAATGTACGGGGCGAGCATGCGCAGTGCGAATCCCT
CCTTTGTCTTCAAAATGCCTAGCAAATCGAACGGCGGTGGCGACGACTTC
GAGCTGCTAACAATGCAGCGATCCGATTTCGCGGAACCAATCTTCCCCAA
TATCAGCCAGTCGGCCACGGCCATCGATTCACCCAGTACCATTCCGCCGG
AAACGAGCGTGAAGACCAGTCTCATGGTATCGCCGCAACAGGATTGGCAG
CAGATGGGTCTGGATGGCTGGACGGGGGAGCTGAAGCCACCAGTAGCCTC
GCTGGAGCAGGATCATAGGGACACTCGACCGCCGATCAGCTGGCAGAACT
CGTATCCCCACGACGAGATTCGTCTGGAGTTCCAGAACCACCACTTCGAT
GGCCGGGTGACGGACATACGCGTGATAACACAAACAACTAGTAAACCAGC
TGAGATGGAGGACCTGATGAATGTTCAGAATGTGTACATAGCGCGGGTAA
ACGATCCCTTCGGTTACTCCATGAAGTGGAGCTTCACCAACGACAGCAGC
CGGGAAAAAGAGCTTTTGCCGGAGGGAGATCGCGGAAAGAGGGACGTTGC
TCGGCTGTACTCCATGATCAAGTGCTCCACGGGCTGTGATCCGCTGATCT
ACAAGGGCTACGGCTGCTACTGCGGATTCGGTGGCCACGGAGTGCCCGCC
GATGGCATCGATCGCTGTTGTCGCGTGCACGACAAGTGCTACGGTCAGAG
CAACTGCATCTCCTATCTGGAATACTTTGTGCCCTACGTGTGGAAGTGCT
ACCGCGGCAAGCCGCTGTGCGCCGTCGATCATGGCGAGTTCGGTGGCCCC
GACTCCTGTGCCGCTCGTCTCTGCCAATGCGACCTGCGGCTTTCCAGGTG
CCTCAAGAGGTACTACTGCCCACACCGACGCTCCATTTGCCACTCGTCCA
GATCTCGACGCTTACAGAACCTAATATTCTTCGATGCAAGCTTTCTAGAC
CAT

BO22836.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:15:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG14507-RC 1122 CG14507-PC 1..1119 17..1135 5595 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG14507-RC 1233 CG14507-RC 47..1167 15..1135 5605 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29226270..29226938 1135..467 3345 100 Minus
3R 32079331 3R 29227225..29227679 469..15 2275 100 Minus
Blast to na_te.dros performed on 2014-11-28 03:15:39 has no hits.

BO22836.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:04 Download gff for BO22836.complete
Subject Subject Range Query Range Percent Splice Strand
CG14507-RC 6..1119 22..1137 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:21 Download gff for BO22836.complete
Subject Subject Range Query Range Percent Splice Strand
CG14507-RC 54..1167 22..1137 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:46:20 Download gff for BO22836.complete
Subject Subject Range Query Range Percent Splice Strand
CG14507-RC 54..1167 22..1137 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:46:20 Download gff for BO22836.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29226267..29226936 469..1137 99 <- Minus
3R 29227226..29227672 22..468 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:21 Download gff for BO22836.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25051989..25052658 469..1137 99 <- Minus
arm_3R 25052948..25053394 22..468 100   Minus

BO22836.pep Sequence

Translation from 16 to 1153

> BO22836.pep
MLWIMGLVVAAVRLNGQASGAANVTVIEDIRSAFRGVTNDTELLNHIIPE
MYGASMRSANPSFVFKMPSKSNGGGDDFELLTMQRSDFAEPIFPNISQSA
TAIDSPSTIPPETSVKTSLMVSPQQDWQQMGLDGWTGELKPPVASLEQDH
RDTRPPISWQNSYPHDEIRLEFQNHHFDGRVTDIRVITQTTSKPAEMEDL
MNVQNVYIARVNDPFGYSMKWSFTNDSSREKELLPEGDRGKRDVARLYSM
IKCSTGCDPLIYKGYGCYCGFGGHGVPADGIDRCCRVHDKCYGQSNCISY
LEYFVPYVWKCYRGKPLCAVDHGEFGGPDSCAARLCQCDLRLSRCLKRYY
CPHRRSICHSSRSRRLQNLIFFDASFLDH

BO22836.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:09:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14507-PC 373 CG14507-PC 1..373 1..373 2037 100 Plus