BO22847.complete Sequence
886 bp assembled on 2010-01-15
GenBank Submission: KX796724
> BO22847.complete
GAAGTTATCAGTCGACATGGCTCACTTCAGTGGTCATCGCCAGCCGGCGA
CGGTGCCGTCCCATTTCAAGGATCTCTTCACCAATGGCCAGTTGGGTGCG
GCGGAGGAGAGCAACAATAATGACCAGAACGAGCAGGAGAATCGTCCCAG
TAACAATAACAATGCTGGACCTTCGGATCCCGCCTGCTGGGTCTTCGGTT
ACGGATCCTTGTGCTGGCATCCTGGCTTTAATTACACCAAGTGCATTACG
GGATATATTCGAGGATATGTTCGCCGCTTCTGGCAGGGCAACGTCACACA
TCGCGGCTGTGAAGAGAAGCCTGGACGTGTTGCAACGCTCGTTGAGGACA
AAGAGGGAATCACTTGGGGCTGCGCCTACAGAATAACAGGCAGCACGGCA
CTGGATTATCTCAAGCAGCGGGAGTGCACACTGGGTGGCTATGCAACAAT
CGATACCAAGTTCTTCCCGCGCGTCGCCTCGCAGGACACGCCCTTCAGCG
GCGAGGCGGTCGAGGTACTGGTCTATGTGGCGACGCCAGAGAATATCTAT
TGGTTGGGCGATGACCCGGTCGAGGAGATTGCCCAGCAGATCGTATCCTG
CCGCGGTCCCAGCGGACACAATGCCGAGTACCTGTTGCGCCTGGCCCTGT
TCATGCACGAGGAGATTCCCGGCGTGAGGGACGATCATCTGTTCGAGCTG
GAGCAATTGGTTTTAGAGGAACTGTACCGCCGCCAAATACCTCTGTCATC
TGTGATGGGCCGCAATCCAGATAGGATACGCCGCGACTCGCACGAGGACA
TCCGCCGCCCGCCATCCTTCGAGTTCACCTCCCGTGTGCCCGACACCAAG
CTGCGTTGCCTGAACATTGCAAGCTTTCTAGACCAT
BO22847.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:15:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10365-RD | 855 | CG10365-PD | 1..852 | 17..868 | 4260 | 100 | Plus |
| CG10365-RA | 855 | CG10365-PA | 1..852 | 17..868 | 4260 | 100 | Plus |
| CG10365-RB | 855 | CG10365-PB | 1..852 | 17..868 | 4260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10365-RD | 1642 | CG10365-RD | 519..1370 | 17..868 | 4260 | 100 | Plus |
| CG10365-RA | 1427 | CG10365-RA | 304..1155 | 17..868 | 4260 | 100 | Plus |
| CG10365-RB | 1473 | CG10365-RB | 350..1201 | 17..868 | 4260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23730793..23731227 | 434..868 | 2175 | 100 | Plus |
| 3R | 32079331 | 3R | 23728857..23729159 | 17..319 | 1515 | 100 | Plus |
| 3R | 32079331 | 3R | 23730647..23730729 | 354..436 | 415 | 100 | Plus |
| 3R | 32079331 | 3R | 23729935..23729973 | 318..356 | 195 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:15:34 has no hits.
BO22847.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:03 Download gff for
BO22847.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10365-RA | 262..1113 | 17..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:18 Download gff for
BO22847.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10365-RB | 350..1201 | 17..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:46:18 Download gff for
BO22847.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10365-RB | 350..1201 | 17..870 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:46:18 Download gff for
BO22847.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23728857..23729159 | 17..319 | 100 | -> | Plus |
| 3R | 23729937..23729972 | 320..355 | 100 | -> | Plus |
| 3R | 23730649..23730727 | 356..434 | 100 | -> | Plus |
| 3R | 23730794..23731227 | 435..870 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:18 Download gff for
BO22847.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19554579..19554881 | 17..319 | 100 | -> | Plus |
| arm_3R | 19555659..19555694 | 320..355 | 100 | -> | Plus |
| arm_3R | 19556371..19556449 | 356..434 | 100 | -> | Plus |
| arm_3R | 19556516..19556949 | 435..870 | 99 | | Plus |
BO22847.pep Sequence
Translation from 16 to 886
> BO22847.pep
MAHFSGHRQPATVPSHFKDLFTNGQLGAAEESNNNDQNEQENRPSNNNNA
GPSDPACWVFGYGSLCWHPGFNYTKCITGYIRGYVRRFWQGNVTHRGCEE
KPGRVATLVEDKEGITWGCAYRITGSTALDYLKQRECTLGGYATIDTKFF
PRVASQDTPFSGEAVEVLVYVATPENIYWLGDDPVEEIAQQIVSCRGPSG
HNAEYLLRLALFMHEEIPGVRDDHLFELEQLVLEELYRRQIPLSSVMGRN
PDRIRRDSHEDIRRPPSFEFTSRVPDTKLRCLNIASFLDH
BO22847.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:09:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10365-PD | 284 | CG10365-PD | 1..284 | 1..284 | 1551 | 100 | Plus |
| CG10365-PA | 284 | CG10365-PA | 1..284 | 1..284 | 1551 | 100 | Plus |
| CG10365-PB | 284 | CG10365-PB | 1..284 | 1..284 | 1551 | 100 | Plus |
| CG10365-PC | 284 | CG10365-PC | 1..284 | 1..284 | 1551 | 100 | Plus |
| CG2540-PA | 311 | CG2540-PA | 60..244 | 46..228 | 303 | 40.9 | Plus |
