BO22884.complete Sequence
1012 bp assembled on 2010-01-15
GenBank Submission: KX794067
> BO22884.complete
GAAGTTATCAGTCGACATGCGTCCCCCAGAGTTCAAGCTTAACAATCCGC
CGGAGGACCTGATCTCCGCTGTGAAATTCGGCCCCAAATCGAATCAATAC
ATGGCGGCGTCTTCTTGGGACGGAACACTTAGATTCTATGATGTGCCGGC
AAACCAGCTGCGTCAGAAATTCGTGCAGGATGCCCCTCTTCTCGACTGTG
CCTTCATGGACATAGTGCACGTGGTCAGTGGCTCCCTGGACAACCAGCTG
CGTCTCTTTGATGTCAACACCCAGGCGGAAAGCATAATTGGTGCCCACGA
GGAGCCCATCAGATGCGTGGAGCACGCCGAGTATGTCAATGGCATCCTCA
CGGGTAGCTGGGACAATACCGTGAAGCTGTGGGACATGCGGGAGAAGCGC
TGCGTTGGAACCTTCGAACAGAACAACGGAAAGGTGTACTCCATGTCCGT
GATCGACGAAAAGATCGTGGTGGCCACCTCCGACCGCAAGGTGCTCATCT
GGGACCTTCGCAAGATGGACAGCTACATCATGAAGCGGGAGTCCTCGCTC
AAGTACCAGACCCGCTGCATTCGTCTATTCCCCAACAAAGAAGGCTACGT
GATGTCCTCCATCGAGGGACGGGTGGCAGTGGAGTACCTGGATCACGATC
CTGAGGTGCAGCGCCGCAAGTTCGCTTTCAAGTGCCACCGGAATAGGGAG
CAGAATATCGAACAGATCTACCCCGTTAATGCCTTGAGTTTCCACAATGT
CTATCAGACGTTCGCCACTGGCGGATCCGATGGCATTGTGAACATTTGGG
ATGGCTTCAACAAGAAGCGCCTTTGTCAGTTCCACGAATACGATACCTCC
ATATCCACGCTCAACTTCAGCTCCGATGGCAGCGCCCTGGCCATCGGCTG
CTCCTACTTGGACCAACTGCCAGAGACGCCGGCTACAGTGCCACATCCGG
CTATCTATATACGCTATCCCACGGACCAGGAAACTAAACAGAAAGCAAGC
TTTCTAGACCAT
BO22884.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:16:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bub3-RB | 981 | CG7581-PB | 1..978 | 17..994 | 4890 | 100 | Plus |
| Bub3-RA | 981 | CG7581-PA | 1..978 | 17..994 | 4890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bub3-RB | 1362 | CG7581-RB | 114..1091 | 17..994 | 4890 | 100 | Plus |
| Bub3-RA | 1236 | CG7581-RA | 114..1091 | 17..994 | 4890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29674278..29675064 | 994..208 | 3935 | 100 | Minus |
| 3R | 32079331 | 3R | 29675116..29675308 | 209..17 | 965 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:16:30 has no hits.
BO22884.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:13 Download gff for
BO22884.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bub3-RA | 112..1089 | 17..996 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:42 Download gff for
BO22884.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bub3-RA | 114..1091 | 17..996 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:46:37 Download gff for
BO22884.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bub3-RA | 114..1091 | 17..996 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:46:37 Download gff for
BO22884.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29674276..29675063 | 209..996 | 99 | <- | Minus |
| 3R | 29675117..29675308 | 17..208 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:42 Download gff for
BO22884.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25499998..25500785 | 209..996 | 99 | <- | Minus |
| arm_3R | 25500839..25501030 | 17..208 | 100 | | Minus |
BO22884.pep Sequence
Translation from 16 to 1012
> BO22884.pep
MRPPEFKLNNPPEDLISAVKFGPKSNQYMAASSWDGTLRFYDVPANQLRQ
KFVQDAPLLDCAFMDIVHVVSGSLDNQLRLFDVNTQAESIIGAHEEPIRC
VEHAEYVNGILTGSWDNTVKLWDMREKRCVGTFEQNNGKVYSMSVIDEKI
VVATSDRKVLIWDLRKMDSYIMKRESSLKYQTRCIRLFPNKEGYVMSSIE
GRVAVEYLDHDPEVQRRKFAFKCHRNREQNIEQIYPVNALSFHNVYQTFA
TGGSDGIVNIWDGFNKKRLCQFHEYDTSISTLNFSSDGSALAIGCSYLDQ
LPETPATVPHPAIYIRYPTDQETKQKASFLDH
BO22884.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:09:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bub3-PB | 326 | CG7581-PB | 1..326 | 1..326 | 1735 | 100 | Plus |
| Bub3-PA | 326 | CG7581-PA | 1..326 | 1..326 | 1735 | 100 | Plus |
| Rae1-PA | 346 | CG9862-PA | 10..315 | 2..297 | 401 | 32.4 | Plus |
| CG12782-PA | 336 | CG12782-PA | 14..308 | 5..297 | 286 | 27.8 | Plus |
| Gbeta5-PA | 358 | CG10763-PA | 83..348 | 27..294 | 203 | 23.3 | Plus |
