Clone BO22893 Report

Search the DGRC for BO22893

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:228
Well:93
Vector:pDNR-Dual
Associated Gene/TranscriptCG16898-RA
Protein status:BO22893.pep: Imported from assembly
Sequenced Size:1255

Clone Sequence Records

BO22893.complete Sequence

1255 bp assembled on 2010-01-15

GenBank Submission: KX800029

> BO22893.complete
GAAGTTATCAGTCGCCATGTTACCCAATTGGCTTACCGAAGAATATTTAC
AGCCGAAATTGAGGGCTTACTACAAGGATGATCAGCTGAAGGTCGTGAAA
GTCTGGGCAAAGCCAGCAACCGAAAAAGGTCAAAACTACATGAGCCTTAT
GACCCGTATCCACGTGGAGATTCAGCAGGGCGATGGATTATTGCAAAATA
GAACCTACATTATCAAGGAATCCCTATCAGAAGATTGTCCCCAGGCGAAG
GTATTTTTGGAGTATGATGTGTATAACCGGGAAATGGATATGTACGAGTT
TATCCTGCCGAAAATGAATGAACTTCTTCAAGAAGTTGGCCTTACTGGAA
AGTTCACTGCAGATACGATTTTCGTAGACCGGGAATACAGAACCATAATA
TTGGAAGATCTGGCGCAGTATAACTACGTGAATGCGGATCGGGTGAAGCA
GCTGGATCTGGCTCATACGAAATTGACTTTGGAAGTGTTGGCAAAGTTCC
ATGCAGCATCCATTGTCGTGAAACAGCGCCATCCCGAACTCCTGACCAAG
AGCCTTTTTATTCACTGTTTTTCGCGAGACAATAAAGGTTACACGGAGGT
GTACGAAGGTGTTTTATCGGCTTTTATAAGGTTCATAAATGAACAACCAG
TTTTAAAGAAAAAGTACGGTAATAAATTACAAAAAATACATGAAAATATC
ATGGATTATGGAGCCAGGACCTTTGAGGTCGGAGAACAAGAACTGCTGAC
CTTAAGTCATGGTGATTGCTGGACCACCAACTTTTTGTATCAGTATGATG
ATGCGAGCAATCCCCAATCAGCCGTAGCCATAGACTTTCAATTCAGCAAC
TTCACCTCCCCTGTCAACGACTTGCATCAATTCTTCACCGTTTCACTGCG
AGATGAAGTTCAGGACATGGAATCCGTTCTTGTTGAGAAATACTACAGCG
ACCTCAAAACGAACGTGGATACTCTGTCCTATAAGGGAATATTTCCTAGT
CTCCAGGGGTTCCAGAAACAGTTCGAAAGTCGTCGATTCATGTGTCTGTT
AGCCCATCTCTTCAAGCCCGTTATAATATACGACGGCACTGAAGTGAGCT
CAGACTTCTCAAGTGTCTATAAAGATACCGAAGAGGGCATTCGATTCCAG
AAAGCTATCTATGCCAACGAAAGGGTGTTGAAAAGTGCAACAAAATTATT
AGCTATGCTTGATGCCAAGGGTGTTTTGAATCTTCAGGCAAGCTTTCTAG
ACCAT

BO22893.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:16:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG16898-RA 1224 CG16898-PA 1..1221 17..1237 6105 100 Plus
CG33301-RB 1224 CG33301-PB 1..921 17..937 480 70.1 Plus
CG33301-RA 1224 CG33301-PA 1..921 17..937 480 70.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG16898-RA 1325 CG16898-RA 31..1251 17..1237 6105 100 Plus
CG33301-RB 1563 CG33301-RB 37..957 17..937 480 70.1 Plus
CG33301-RA 1318 CG33301-RA 37..957 17..937 480 70.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:39
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20003945..20004973 1045..17 5145 100 Minus
2R 25286936 2R 20003694..20003887 1237..1044 970 100 Minus
2L 23513712 2L 10049616..10050536 17..937 480 70.1 Plus
Blast to na_te.dros performed 2014-11-28 03:16:40
Subject Length Description Subject Range Query Range Score Percent Strand
Burdock 6411 Burdock DMU89994 6411bp Derived from U89994 (g1905850) (Rel. 51, Last updated, Version 1). 4927..4984 681..736 114 69 Plus

BO22893.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:05:15 Download gff for BO22893.complete
Subject Subject Range Query Range Percent Splice Strand
CG16898-RA 20..1235 22..1239 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:47 Download gff for BO22893.complete
Subject Subject Range Query Range Percent Splice Strand
CG16898-RA 20..1235 22..1239 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:46:42 Download gff for BO22893.complete
Subject Subject Range Query Range Percent Splice Strand
CG16898-RA 36..1251 22..1239 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:46:42 Download gff for BO22893.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20003692..20003887 1044..1239 98 <- Minus
2R 20003947..20004968 22..1043 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:47 Download gff for BO22893.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15891197..15891392 1044..1239 98 <- Minus
arm_2R 15891452..15892473 22..1043 100   Minus

BO22893.pep Sequence

Translation from 16 to 1255

> BO22893.pep
MLPNWLTEEYLQPKLRAYYKDDQLKVVKVWAKPATEKGQNYMSLMTRIHV
EIQQGDGLLQNRTYIIKESLSEDCPQAKVFLEYDVYNREMDMYEFILPKM
NELLQEVGLTGKFTADTIFVDREYRTIILEDLAQYNYVNADRVKQLDLAH
TKLTLEVLAKFHAASIVVKQRHPELLTKSLFIHCFSRDNKGYTEVYEGVL
SAFIRFINEQPVLKKKYGNKLQKIHENIMDYGARTFEVGEQELLTLSHGD
CWTTNFLYQYDDASNPQSAVAIDFQFSNFTSPVNDLHQFFTVSLRDEVQD
MESVLVEKYYSDLKTNVDTLSYKGIFPSLQGFQKQFESRRFMCLLAHLFK
PVIIYDGTEVSSDFSSVYKDTEEGIRFQKAIYANERVLKSATKLLAMLDA
KGVLNLQASFLDH

BO22893.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:09:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG16898-PA 407 CG16898-PA 1..407 1..407 2107 100 Plus
CG33301-PB 407 CG33301-PB 1..407 1..407 1415 63.9 Plus
CG33301-PA 407 CG33301-PA 1..407 1..407 1415 63.9 Plus
CG11889-PB 417 CG11889-PB 10..415 3..405 764 40 Plus
CG11889-PA 417 CG11889-PA 10..415 3..405 764 40 Plus