BO22956.complete Sequence
931 bp assembled on 2010-01-27
GenBank Submission: KX794408
> BO22956.complete
GAAGTTATCAGTCGACATGGGCAAGGATTTCGATGCTGTTGGATTCGTCA
AGGATTTCGCTGCCGGAGGCATCTCCGCAGCTGTCTCCAAGACTGCCGTC
GCCCCCATTGAGCGTGTGAAACTGCTCCTGCAGGTTCAGCACATCTCGAA
ACAAATCAGCCCCGACAAGCAGTACAAGGGCATGGTTGATTGCTTTATCC
GCATTCCAAAGGAGCAGGGATTCTCGTCCTTCTGGCGCGGCAACTTGGCC
AACGTCATCAGATACTTCCCAACCCAGGCTCTGAACTTTGCCTTCAAGGA
CAAGTACAAGCAGGTCTTCCTGGGTGGCGTGGACAAGAACACCCAGTTCT
GGCGCTACTTCGCCGGCAACTTGGCCTCCGGTGGTGCCGCTGGTGCTACC
TCTCTGTGCTTTGTCTACCCCTTGGACTTTGCCCGTACTCGCTTGGCTGC
TGATACTGGCAAGGGTGGTCAGCGTGAATTCACCGGTCTGGGCAACTGCT
TGACCAAGATCTTCAAGAGCGACGGCATCGTTGGATTGTACCGTGGTTTC
GGAGTGTCCGTGCAGGGCATCATCATCTACCGTGCCGCCTACTTCGGCTT
CTACGATACCGCTCGCGGTATGCTGCCCGACCCCAAGAACACACCCATCT
ACATCAGCTGGGCCATCGCCCAGGTTGTGACAACCGTCGCTGGCATCGTG
TCCTATCCCTTCGATACCGTGCGTCGTCGCATGATGATGCAGTCTGGTCG
CAAGGCCACCGAGGTCATCTACAAGAACACACTGCACTGCTGGGCCACCA
TCGCCAAGCAGGAGGGCACCGGTGCCTTCTTCAAGGGCGCCTTCTCCAAC
ATTCTCAGAGGAACTGGTGGCGCTTTCGTGCTTGTGTTGTACGATGAGAT
CAAGAAGGTCTTGGCAAGCTTTCTAGACCAT
BO22956.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:07:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sesB-RE | 900 | CG16944-PE | 1..897 | 17..913 | 4485 | 100 | Plus |
| sesB-RD | 939 | CG16944-PD | 40..936 | 17..913 | 4485 | 100 | Plus |
| sesB-RB | 900 | CG16944-PB | 1..897 | 17..913 | 4485 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:07:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sesB-RE | 1685 | CG16944-RE | 158..1054 | 17..913 | 4485 | 100 | Plus |
| sesB-RD | 1853 | CG16944-RD | 226..1122 | 17..913 | 4485 | 100 | Plus |
| sesB-RB | 1640 | CG16944-RB | 113..1009 | 17..913 | 4485 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:07:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10781624..10782096 | 913..441 | 2365 | 100 | Minus |
| X | 23542271 | X | 10782378..10782676 | 315..17 | 1495 | 100 | Minus |
| X | 23542271 | X | 10782173..10782302 | 441..312 | 650 | 100 | Minus |
| X | 23542271 | X | 10779285..10779600 | 852..537 | 500 | 77.2 | Minus |
| X | 23542271 | X | 10780210..10780337 | 300..173 | 445 | 89.8 | Minus |
| X | 23542271 | X | 10780001..10780123 | 433..311 | 300 | 82.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:07:10 has no hits.
BO22956.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:04:17 Download gff for
BO22956.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sesB-RB | 109..1005 | 17..915 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:47 Download gff for
BO22956.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sesB-RC | 220..1116 | 17..915 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:18 Download gff for
BO22956.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sesB-RB | 113..1009 | 17..915 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:18 Download gff for
BO22956.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10782380..10782676 | 17..313 | 100 | | Minus |
| X | 10781622..10782095 | 442..915 | 99 | <- | Minus |
| X | 10782173..10782300 | 314..441 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:47 Download gff for
BO22956.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10675655..10676128 | 442..915 | 99 | <- | Minus |
| arm_X | 10676206..10676333 | 314..441 | 100 | <- | Minus |
| arm_X | 10676413..10676709 | 17..313 | 100 | | Minus |
BO22956.pep Sequence
Translation from 16 to 931
> BO22956.pep
MGKDFDAVGFVKDFAAGGISAAVSKTAVAPIERVKLLLQVQHISKQISPD
KQYKGMVDCFIRIPKEQGFSSFWRGNLANVIRYFPTQALNFAFKDKYKQV
FLGGVDKNTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADTGKG
GQREFTGLGNCLTKIFKSDGIVGLYRGFGVSVQGIIIYRAAYFGFYDTAR
GMLPDPKNTPIYISWAIAQVVTTVAGIVSYPFDTVRRRMMMQSGRKATEV
IYKNTLHCWATIAKQEGTGAFFKGAFSNILRGTGGAFVLVLYDEIKKVLA
SFLDH
BO22956.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:54:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sesB-PE | 299 | CG16944-PE | 1..299 | 1..299 | 1559 | 100 | Plus |
| sesB-PB | 299 | CG16944-PB | 1..299 | 1..299 | 1559 | 100 | Plus |
| sesB-PA | 299 | CG16944-PA | 1..299 | 1..299 | 1559 | 100 | Plus |
| sesB-PD | 312 | CG16944-PD | 14..312 | 1..299 | 1559 | 100 | Plus |
| sesB-PC | 312 | CG16944-PC | 14..312 | 1..299 | 1559 | 100 | Plus |
