Clone BO22958 Report

Search the DGRC for BO22958

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:229
Well:58
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO22958.pep: full length peptide match
Sequenced Size:757

Clone Sequence Records

BO22958.complete Sequence

757 bp assembled on 2010-01-27

> BO22958.complete
GAAGTTATCAGTCGACATGTCCAAGAAGGCCAAGACGACAACCGGGGGCA
GCAGCAATGGCAGCAATGCTACCGCCACATCCACAACCACATCCACATCC
AGCAGTATTAAGCACAAGCAGCCGGCGGGCAGCAGCAACAACAATGTTGG
CCAAAGTCAGAGCAAGAAGACAAAGCCCAGCGGCAGCTATAATAGCAATA
GCAACTACTACTACTACGCTGCTGACGAGGAGGAGGGCGGTAGCGCTGAC
TATGCACTGAGCAACTACGATAAGAAGGCTGTCGAGGAGCTGTCCCTGCG
ATTGCTCGACGAACTGAGGGCGGCCAAGTCGCGTCATTTGACCTGTACGG
AAGTGTCGCTACCCTGTGATCTCACGCCGAGCGTGGCCCGGGAAATAATC
CGCGTGTCGGAGAAGGAGCCCCGCGGCATACGCGGCTGCACCATCTACAT
TGAGTTCGAGGATGAGCCGAAGAATTCGCGTCGCATTGCCTCGATCAAGG
TCGATTCGGATACGGTGTCCACATTCGAAGTGTATCTGACCCTCAGGCAG
GATCATCGCGGCTGGACGTCGCTGTTGCCGCAGTTCATGAAGAGTTTGGC
CCGCACGATCACCATCAGTCCGGAGTATACGATCACCAAGAATAAGCTAT
ATTCCGCTGATGGTTTGGGTGCACGCAGGAGCTATAGCTTCGGCAGCCAC
GCCCATAGACCCAGTGCGGCCATCGCCACGCCCACCAACGCAAGCTTTCT
AGACCAT

BO22958.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:06:50
Subject Length Description Subject Range Query Range Score Percent Strand
scyl-RC 843 CG7590-PC 118..840 17..739 3615 100 Plus
scyl-RA 843 CG7590-PA 118..840 17..739 3615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:51
Subject Length Description Subject Range Query Range Score Percent Strand
scyl-RC 3124 CG7590-RC 702..1424 17..739 3615 100 Plus
scyl-RA 2195 CG7590-RA 702..1424 17..739 3615 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11253750..11254472 17..739 3615 100 Plus
Blast to na_te.dros performed 2014-11-28 03:06:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2472 47..217 207 61 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2291..2448 59..217 179 61.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6868 64..217 143 60.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6757..6845 129..214 131 64 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..6809 129..205 126 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2314..2409 111..208 116 59.2 Plus

BO22958.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:04:09 Download gff for BO22958.complete
Subject Subject Range Query Range Percent Splice Strand
scyl-RB 1442..2164 17..741 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:35 Download gff for BO22958.complete
Subject Subject Range Query Range Percent Splice Strand
scyl-RA 702..1424 17..741 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:09 Download gff for BO22958.complete
Subject Subject Range Query Range Percent Splice Strand
scyl-RA 702..1424 17..741 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:09 Download gff for BO22958.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11253750..11254472 17..741 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:35 Download gff for BO22958.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11246850..11247572 17..741 99   Plus

BO22958.pep Sequence

Translation from 16 to 757

> BO22958.pep
MSKKAKTTTGGSSNGSNATATSTTTSTSSSIKHKQPAGSSNNNVGQSQSK
KTKPSGSYNSNSNYYYYAADEEEGGSADYALSNYDKKAVEELSLRLLDEL
RAAKSRHLTCTEVSLPCDLTPSVAREIIRVSEKEPRGIRGCTIYIEFEDE
PKNSRRIASIKVDSDTVSTFEVYLTLRQDHRGWTSLLPQFMKSLARTITI
SPEYTITKNKLYSADGLGARRSYSFGSHAHRPSAAIATPTNASFLDH

BO22958.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:53:19
Subject Length Description Subject Range Query Range Score Percent Strand
scyl-PC 280 CG7590-PC 40..280 1..241 1230 100 Plus
scyl-PA 280 CG7590-PA 40..280 1..241 1230 100 Plus
chrb-PE 233 CG7533-PE 26..233 10..215 419 45.6 Plus
chrb-PC 299 CG7533-PC 92..299 10..215 419 45.6 Plus