BO22958.complete Sequence
757 bp assembled on 2010-01-27
> BO22958.complete
GAAGTTATCAGTCGACATGTCCAAGAAGGCCAAGACGACAACCGGGGGCA
GCAGCAATGGCAGCAATGCTACCGCCACATCCACAACCACATCCACATCC
AGCAGTATTAAGCACAAGCAGCCGGCGGGCAGCAGCAACAACAATGTTGG
CCAAAGTCAGAGCAAGAAGACAAAGCCCAGCGGCAGCTATAATAGCAATA
GCAACTACTACTACTACGCTGCTGACGAGGAGGAGGGCGGTAGCGCTGAC
TATGCACTGAGCAACTACGATAAGAAGGCTGTCGAGGAGCTGTCCCTGCG
ATTGCTCGACGAACTGAGGGCGGCCAAGTCGCGTCATTTGACCTGTACGG
AAGTGTCGCTACCCTGTGATCTCACGCCGAGCGTGGCCCGGGAAATAATC
CGCGTGTCGGAGAAGGAGCCCCGCGGCATACGCGGCTGCACCATCTACAT
TGAGTTCGAGGATGAGCCGAAGAATTCGCGTCGCATTGCCTCGATCAAGG
TCGATTCGGATACGGTGTCCACATTCGAAGTGTATCTGACCCTCAGGCAG
GATCATCGCGGCTGGACGTCGCTGTTGCCGCAGTTCATGAAGAGTTTGGC
CCGCACGATCACCATCAGTCCGGAGTATACGATCACCAAGAATAAGCTAT
ATTCCGCTGATGGTTTGGGTGCACGCAGGAGCTATAGCTTCGGCAGCCAC
GCCCATAGACCCAGTGCGGCCATCGCCACGCCCACCAACGCAAGCTTTCT
AGACCAT
BO22958.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:06:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
scyl-RC | 843 | CG7590-PC | 118..840 | 17..739 | 3615 | 100 | Plus |
scyl-RA | 843 | CG7590-PA | 118..840 | 17..739 | 3615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
scyl-RC | 3124 | CG7590-RC | 702..1424 | 17..739 | 3615 | 100 | Plus |
scyl-RA | 2195 | CG7590-RA | 702..1424 | 17..739 | 3615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11253750..11254472 | 17..739 | 3615 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 03:06:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2472 | 47..217 | 207 | 61 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2291..2448 | 59..217 | 179 | 61.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6868 | 64..217 | 143 | 60.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6845 | 129..214 | 131 | 64 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6809 | 129..205 | 126 | 64.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2409 | 111..208 | 116 | 59.2 | Plus |
BO22958.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 10:04:09 Download gff for
BO22958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
scyl-RB | 1442..2164 | 17..741 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:35 Download gff for
BO22958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
scyl-RA | 702..1424 | 17..741 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:09 Download gff for
BO22958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
scyl-RA | 702..1424 | 17..741 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:09 Download gff for
BO22958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11253750..11254472 | 17..741 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:35 Download gff for
BO22958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11246850..11247572 | 17..741 | 99 | | Plus |
BO22958.pep Sequence
Translation from 16 to 757
> BO22958.pep
MSKKAKTTTGGSSNGSNATATSTTTSTSSSIKHKQPAGSSNNNVGQSQSK
KTKPSGSYNSNSNYYYYAADEEEGGSADYALSNYDKKAVEELSLRLLDEL
RAAKSRHLTCTEVSLPCDLTPSVAREIIRVSEKEPRGIRGCTIYIEFEDE
PKNSRRIASIKVDSDTVSTFEVYLTLRQDHRGWTSLLPQFMKSLARTITI
SPEYTITKNKLYSADGLGARRSYSFGSHAHRPSAAIATPTNASFLDH
BO22958.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:53:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
scyl-PC | 280 | CG7590-PC | 40..280 | 1..241 | 1230 | 100 | Plus |
scyl-PA | 280 | CG7590-PA | 40..280 | 1..241 | 1230 | 100 | Plus |
chrb-PE | 233 | CG7533-PE | 26..233 | 10..215 | 419 | 45.6 | Plus |
chrb-PC | 299 | CG7533-PC | 92..299 | 10..215 | 419 | 45.6 | Plus |