BO23302.complete Sequence
469 bp assembled on 2010-03-31
GenBank Submission: KX799115
> BO23302.complete
GAAGTTATCAGTCGACATGCGTAGCATGGGCTGCTCCAGTTCCAAGACCT
CCGCCACCGTAGAAGACACCAAATCATCGAAGCCCTGCTCCTGCTCAGCC
AAGTCCAGTACAACGAGAATGGCCGCCAAGAAGGAGTACCCTGCCTCGGA
GGCCTTCACCATTCCTTTGGAGAGCGATGACGGTCCGGAGATGCCGCTAA
ACGAGACGGTTCGCCAGCCACCGAAGAGGATTCAGCAACTGATGCAGGAG
GCGGCCAGCTCGGAGCCACTCACCTTGGAGGAGCTGGAGGAGAAGCAGCT
AAAGGCCGAGCAGAGGCGCCAGGAGCTCATGCAGCAGAAACTGGAGATCA
TACAAAAGAATGCCCAGATGCTCATGAAGCCTCATGAGGAAACCGTTGGC
GAAGGCGAAGGAGACCGGAACGAAGGCAAGGAGGAACTACCCGAAAAGGT
CGCAAGCTTTCTAGACCAT
BO23302.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:42:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13578-RA | 438 | CG13578-PA | 1..435 | 17..451 | 2175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13578-RA | 855 | CG13578-RA | 297..731 | 17..451 | 2175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24378306..24378616 | 141..451 | 1555 | 100 | Plus |
| 2R | 25286936 | 2R | 24378127..24378250 | 17..140 | 620 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 15:42:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7258..7370 | 226..337 | 120 | 59.6 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 8711..8823 | 226..337 | 120 | 59.6 | Plus |
BO23302.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:34 Download gff for
BO23302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13578-RA | 297..731 | 17..453 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:43 Download gff for
BO23302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13578-RA | 297..731 | 17..453 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:38 Download gff for
BO23302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13578-RA | 297..731 | 17..453 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:38 Download gff for
BO23302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24378306..24378616 | 141..453 | 99 | | Plus |
| 2R | 24378127..24378250 | 17..140 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:43 Download gff for
BO23302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20265650..20265773 | 17..140 | 100 | -> | Plus |
| arm_2R | 20265829..20266139 | 141..453 | 99 | | Plus |
BO23302.pep Sequence
Translation from 16 to 469
> BO23302.pep
MRSMGCSSSKTSATVEDTKSSKPCSCSAKSSTTRMAAKKEYPASEAFTIP
LESDDGPEMPLNETVRQPPKRIQQLMQEAASSEPLTLEELEEKQLKAEQR
RQELMQQKLEIIQKNAQMLMKPHEETVGEGEGDRNEGKEELPEKVASFLD
H
BO23302.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:55:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13578-PA | 145 | CG13578-PA | 1..145 | 1..145 | 732 | 100 | Plus |
