Clone BO23304 Report

Search the DGRC for BO23304

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:4
Vector:pDNR-Dual
Associated Gene/TranscriptCG14342-RB
Protein status:BO23304.pep: Imported from assembly
Sequenced Size:457

Clone Sequence Records

BO23304.complete Sequence

457 bp assembled on 2010-03-31

GenBank Submission: KX795936

> BO23304.complete
GAAGTTATCAGTCGACATGGATAAACTGCGAGGCAACAATGCGGCTAGCG
AGAATCCCTTCAAGCGGCCGATGAATGCCCTCCAGAAGCAGTGGTACCGC
GTCCTGCTGGCCCGCCGTGTGGGATTCGGGCAGCGTCCTCCGCCCGACGA
AAAGGAGCTAACGTACGCCGACATTTGTCGTAAGCGCTATGCGGCATCGT
TCCGGCGATACAACGAGTGTTTCCGCCGGGAAATGGCCAAACATGAGGAG
ATGCAGCGATGCGCCATCGACGCCATGAGGGTACACAGAACCTTTGCCAT
CACCACACTTTGGCTACCTTTGCACTCGAAGCGGGAAATCAACTCAACGC
TGGAAACCCTCGAAAAGGTTCTCACCGCCAAGGAAAGACGACGCCTGCAG
GAGATTCTCAAGCAGGGAGAGTCCTGGCACTCGCACCGCGCAAGCTTTCT
AGACCAT

BO23304.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:43:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG14342-RB 426 CG14342-PB 1..423 17..439 2115 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG14342-RB 802 CG14342-RB 102..524 17..439 2115 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1204316..1204464 17..165 745 100 Plus
2L 23513712 2L 1204565..1204687 166..288 615 100 Plus
2L 23513712 2L 1204759..1204843 285..369 425 100 Plus
2L 23513712 2L 1204899..1204972 366..439 370 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:43:58 has no hits.

BO23304.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:36 Download gff for BO23304.complete
Subject Subject Range Query Range Percent Splice Strand
CG14342-RB 76..498 17..441 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:06 Download gff for BO23304.complete
Subject Subject Range Query Range Percent Splice Strand
CG14342-RB 102..524 17..441 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:03 Download gff for BO23304.complete
Subject Subject Range Query Range Percent Splice Strand
CG14342-RB 102..524 17..441 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:03 Download gff for BO23304.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1204316..1204464 17..165 100 -> Plus
2L 1204565..1204687 166..288 100 -> Plus
2L 1204763..1204841 289..367 100 -> Plus
2L 1204901..1204972 368..441 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:06 Download gff for BO23304.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1204565..1204687 166..288 100 -> Plus
arm_2L 1204763..1204841 289..367 100 -> Plus
arm_2L 1204901..1204972 368..441 97   Plus
arm_2L 1204316..1204464 17..165 100 -> Plus

BO23304.pep Sequence

Translation from 16 to 457

> BO23304.pep
MDKLRGNNAASENPFKRPMNALQKQWYRVLLARRVGFGQRPPPDEKELTY
ADICRKRYAASFRRYNECFRREMAKHEEMQRCAIDAMRVHRTFAITTLWL
PLHSKREINSTLETLEKVLTAKERRRLQEILKQGESWHSHRASFLDH

BO23304.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:55:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG14342-PB 141 CG14342-PB 1..141 1..141 749 100 Plus