BO23304.complete Sequence
457 bp assembled on 2010-03-31
GenBank Submission: KX795936
> BO23304.complete
GAAGTTATCAGTCGACATGGATAAACTGCGAGGCAACAATGCGGCTAGCG
AGAATCCCTTCAAGCGGCCGATGAATGCCCTCCAGAAGCAGTGGTACCGC
GTCCTGCTGGCCCGCCGTGTGGGATTCGGGCAGCGTCCTCCGCCCGACGA
AAAGGAGCTAACGTACGCCGACATTTGTCGTAAGCGCTATGCGGCATCGT
TCCGGCGATACAACGAGTGTTTCCGCCGGGAAATGGCCAAACATGAGGAG
ATGCAGCGATGCGCCATCGACGCCATGAGGGTACACAGAACCTTTGCCAT
CACCACACTTTGGCTACCTTTGCACTCGAAGCGGGAAATCAACTCAACGC
TGGAAACCCTCGAAAAGGTTCTCACCGCCAAGGAAAGACGACGCCTGCAG
GAGATTCTCAAGCAGGGAGAGTCCTGGCACTCGCACCGCGCAAGCTTTCT
AGACCAT
BO23304.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:43:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14342-RB | 426 | CG14342-PB | 1..423 | 17..439 | 2115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14342-RB | 802 | CG14342-RB | 102..524 | 17..439 | 2115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1204316..1204464 | 17..165 | 745 | 100 | Plus |
2L | 23513712 | 2L | 1204565..1204687 | 166..288 | 615 | 100 | Plus |
2L | 23513712 | 2L | 1204759..1204843 | 285..369 | 425 | 100 | Plus |
2L | 23513712 | 2L | 1204899..1204972 | 366..439 | 370 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:43:58 has no hits.
BO23304.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:36 Download gff for
BO23304.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14342-RB | 76..498 | 17..441 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:06 Download gff for
BO23304.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14342-RB | 102..524 | 17..441 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:03 Download gff for
BO23304.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14342-RB | 102..524 | 17..441 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:03 Download gff for
BO23304.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1204316..1204464 | 17..165 | 100 | -> | Plus |
2L | 1204565..1204687 | 166..288 | 100 | -> | Plus |
2L | 1204763..1204841 | 289..367 | 100 | -> | Plus |
2L | 1204901..1204972 | 368..441 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:06 Download gff for
BO23304.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1204565..1204687 | 166..288 | 100 | -> | Plus |
arm_2L | 1204763..1204841 | 289..367 | 100 | -> | Plus |
arm_2L | 1204901..1204972 | 368..441 | 97 | | Plus |
arm_2L | 1204316..1204464 | 17..165 | 100 | -> | Plus |
BO23304.pep Sequence
Translation from 16 to 457
> BO23304.pep
MDKLRGNNAASENPFKRPMNALQKQWYRVLLARRVGFGQRPPPDEKELTY
ADICRKRYAASFRRYNECFRREMAKHEEMQRCAIDAMRVHRTFAITTLWL
PLHSKREINSTLETLEKVLTAKERRRLQEILKQGESWHSHRASFLDH
BO23304.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:55:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14342-PB | 141 | CG14342-PB | 1..141 | 1..141 | 749 | 100 | Plus |