BO23306.complete Sequence
550 bp assembled on 2010-03-31
GenBank Submission: KX799092
> BO23306.complete
GAAGTTATCAGTCGACATGTCCAAACTGTCATCTGGTGGTCCCTCCATGG
CGGCCAAGCTGCTGGCCATAATGCTTCTGCTGGTGGCGACGGGAGTGCAG
GCGCGGCGTCTGGGCCACCGACGCCTAATCATCCACGTGCCGGTCAAGGT
GAAGACGCACCACCACACTCACACCGTGTACAAGGTGCTACACGGATCAC
ATGGTGGCGGTGGCGGCGGAGGTGTAAAGCAAACGGTATACAAAGTGCTT
GGCTTCTCCACACACGGTGGTGGCATTGCCAAGGGCGGCGTAGGAGGAGG
AGGAGGCATTGGCCATGGAGCCCACGGTAGCTACGACATGGGCAGCATAG
GAGGAATGGGACACGGCGAAATCACATACGAGGACATGCACGGATGCGAG
AGCGGCAAAGTGATTCCGGCGGCCAGAGACATGATTTTCAATCACTACTC
GCGTCACGGCCAAAGCGATGGAACTGCCGAGGATTACGCCGAGGAGCTGG
ACGACTTTGTAGACCTAAGGGATGGCTGGTTGGCAAGCTTTCTAGACCAT
BO23306.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13931-RB | 519 | CG13931-PB | 1..516 | 17..532 | 2580 | 100 | Plus |
| CG13931-RA | 519 | CG13931-PA | 1..516 | 17..532 | 2580 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13931-RB | 1063 | CG13931-RB | 106..621 | 17..532 | 2580 | 100 | Plus |
| CG13931-RA | 663 | CG13931-RA | 106..621 | 17..532 | 2580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1701398..1701904 | 532..26 | 2535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:45:12 has no hits.
BO23306.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:39 Download gff for
BO23306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13931-RA | 100..615 | 17..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:20 Download gff for
BO23306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13931-RA | 106..621 | 17..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:32 Download gff for
BO23306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13931-RA | 106..621 | 17..534 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:32 Download gff for
BO23306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1701395..1701907 | 23..534 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:20 Download gff for
BO23306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1701395..1701907 | 23..534 | 99 | | Minus |
BO23306.pep Sequence
Translation from 16 to 550
> BO23306.pep
MSKLSSGGPSMAAKLLAIMLLLVATGVQARRLGHRRLIIHVPVKVKTHHH
THTVYKVLHGSHGGGGGGGVKQTVYKVLGFSTHGGGIAKGGVGGGGGIGH
GAHGSYDMGSIGGMGHGEITYEDMHGCESGKVIPAARDMIFNHYSRHGQS
DGTAEDYAEELDDFVDLRDGWLASFLDH
BO23306.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:56:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13931-PB | 172 | CG13931-PB | 1..172 | 1..172 | 925 | 100 | Plus |
| CG13931-PA | 172 | CG13931-PA | 1..172 | 1..172 | 925 | 100 | Plus |
