BO23310.complete Sequence
691 bp assembled on 2010-03-31
GenBank Submission: KX798936
> BO23310.complete
GAAGTTATCAGTCGACATGTCGGATTTGGGGAAAGATGTGGCGAGCGAAG
AAGGCTCCAATGGAAGCAGGGAAACCATTTGGTACACCATTGGAGAGCTT
GTGGAAATGGTCGAGTGTCCAGGTTGTGGAATATCCATGGTATCGTTCAA
AAATCGCTTCGCCCACATCAAGAAGTGCTTCAGCATCAAGAGACGAGGTC
CTTTGTACAGGATTTATGGATATGCGGAGTGCAAGTGCGGCTTTCTTATT
GCAGACACGGAAAAAGCCCGGAAACTGCATTGTTGTTCGGGAAAACTTCG
CCCCTGCAAGCCAATCATACCAACTGAGCCGAAAGTCCCGGTGACAAAAC
ATGCTGAAGAACTAACATCAACTAAAAGGGAACAGGCTTTGCAGCCGTTG
ATTAGAAATTTTATCAGTCCCATCAAACAACAGGAGTTTCCATCTTTGGA
TATATCATATTCCAGTAAATATGATCCTAAACCAACATCGAGGCCACGCG
TCCGTAACTTTGATAGACCACACAGAAGTCAAGCTCCAAAGGAAGTCTGT
GTGTACTCCATAATTCGGAGGAATGGGGCTATCTCAGTGACAGGAAGATC
CATCGTTAGGTACCGGGGTGGCAACGAAAACCTTGCCATACTTAAAAGGC
GAGAATTAAAAATAAAATACGTAGCAAGCTTTCTAGACCAT
BO23310.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30096-RB | 660 | CG30096-PB | 1..657 | 17..673 | 3285 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30096-RB | 1130 | CG30096-RB | 159..815 | 17..673 | 3285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16321130..16321514 | 673..289 | 1925 | 100 | Minus |
| 2R | 25286936 | 2R | 16321565..16321819 | 294..40 | 1260 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:46:03 has no hits.
BO23310.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:41 Download gff for
BO23310.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30096-RB | 107..763 | 17..675 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:30 Download gff for
BO23310.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30096-RB | 159..815 | 17..675 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:50 Download gff for
BO23310.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30096-RB | 159..815 | 17..675 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:50 Download gff for
BO23310.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16321128..16321513 | 290..675 | 99 | <- | Minus |
| 2R | 16321570..16321818 | 41..289 | 100 | <- | Minus |
| 2R | 16321873..16321896 | 17..40 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:30 Download gff for
BO23310.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12209378..12209401 | 17..40 | 100 | | Minus |
| arm_2R | 12208633..12209018 | 290..675 | 99 | <- | Minus |
| arm_2R | 12209075..12209323 | 41..289 | 100 | <- | Minus |
BO23310.pep Sequence
Translation from 16 to 691
> BO23310.pep
MSDLGKDVASEEGSNGSRETIWYTIGELVEMVECPGCGISMVSFKNRFAH
IKKCFSIKRRGPLYRIYGYAECKCGFLIADTEKARKLHCCSGKLRPCKPI
IPTEPKVPVTKHAEELTSTKREQALQPLIRNFISPIKQQEFPSLDISYSS
KYDPKPTSRPRVRNFDRPHRSQAPKEVCVYSIIRRNGAISVTGRSIVRYR
GGNENLAILKRRELKIKYVASFLDH
BO23310.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:56:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30096-PB | 219 | CG30096-PB | 1..219 | 1..219 | 1158 | 100 | Plus |
