Clone BO23311 Report

Search the DGRC for BO23311

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG14515-RA
Protein status:BO23311.pep: Imported from assembly
Sequenced Size:538

Clone Sequence Records

BO23311.complete Sequence

538 bp assembled on 2010-03-31

GenBank Submission: KX794195

> BO23311.complete
GAAGTTATCAGTCGACATGAAGGATCGATTCAAGTGGTTGTCGCTGGAGC
TGCTCCTGCTGATAGGCGCCGCAGTCGCCTTTCCGGACGGCGCTCCGGCG
GACACGTGCGTGAAGCAGCGGGCGAATCAGCCGAATCATGGCAAGGCCCG
GAGTCAGCCGGCTCACTCGAATCCGTACGAGGTGGTGGCCGATGCGCAGA
CCTACCATCCCGGCCAGCAGATATCGGTGGTCATCTACCCGCACTCGGAC
CAGAGCACCGTCTTCCGGGGATTTTTCCTGCAGGCGCGTGATGCCAACTC
GAACGAGTGGATCGGCGAGTGGGTGCAGAGCGAGAACACCAAGACCATTC
CAGAGTGCTCGGCCATTACGCACTCGGACAACCGGGACAAGCTGGGCGCC
AAGCTCATCTGGAAGGCACCGCAAAATAAGCGGGGACAAGTCTACTTCAC
GGGCACTGTGCTACAGGAGTACGGAACGTTTTGGAGCGACATTGTGAACA
AAGTGCAGGCGGAGCGGCCAGCAAGCTTTCTAGACCAT

BO23311.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:47:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG14515-RA 507 CG14515-PA 1..504 17..520 2505 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:47:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG14515-RA 639 CG14515-RA 78..582 16..520 2510 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:47:02
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29197633..29198068 16..451 2165 99.8 Plus
3R 32079331 3R 29199085..29199154 451..520 350 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:47:03 has no hits.

BO23311.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:42 Download gff for BO23311.complete
Subject Subject Range Query Range Percent Splice Strand
CG14515-RA 52..555 17..522 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:41 Download gff for BO23311.complete
Subject Subject Range Query Range Percent Splice Strand
CG14515-RA 79..582 17..522 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:11 Download gff for BO23311.complete
Subject Subject Range Query Range Percent Splice Strand
CG14515-RA 79..582 17..522 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:11 Download gff for BO23311.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29197634..29198067 17..450 99 -> Plus
3R 29199085..29199154 451..522 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:41 Download gff for BO23311.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25023356..25023789 17..450 99 -> Plus
arm_3R 25024807..25024876 451..522 97   Plus

BO23311.pep Sequence

Translation from 16 to 538

> BO23311.pep
MKDRFKWLSLELLLLIGAAVAFPDGAPADTCVKQRANQPNHGKARSQPAH
SNPYEVVADAQTYHPGQQISVVIYPHSDQSTVFRGFFLQARDANSNEWIG
EWVQSENTKTIPECSAITHSDNRDKLGAKLIWKAPQNKRGQVYFTGTVLQ
EYGTFWSDIVNKVQAERPASFLDH

BO23311.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:56:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG14515-PA 168 CG14515-PA 1..168 1..168 901 100 Plus