BO23314.complete Sequence
508 bp assembled on 2012-04-24
GenBank Submission: KX799704
> BO23314.complete
GAAGTTATCAGTCGACATGCGTGCGGTTATACAAAGGGTTAAGGCTGCCA
AAGTGACGGTGTTGGATGAGCTGGTGTCCTCCATTGGACCAGGCCTGTGC
GTGCTGGTGGGAATCAAGGCCAGCGACACCGCCAAGGATGTTGAGTATCT
TGTCCGGAAAATCTTGGCTCTCCGTTTATTCGAGGAGGAGGGCAAGCGTT
GGCAAAAGTCCGTGAAGGATCTGAACCTAGAACTGCTGTGCGTCTCGCAG
TTTACACTGTATCACCGCCTTAAGGGCAACAAACCGGATTTTTTGGCTGC
CATGAAGGGCGAGGAGGCGCAGGAGTTGTACAATCAATTTTTGGATCGCC
TAGGTCAATCCTACGATAGCACCAAGATTAAAGATGGCAAATTTGGAGCA
TACATGCAAGTGCACATAGAAAACGATGGACCCGTAACCATTAATTTGGA
GTCCCCCGAACAAAAGGATACTGACAGAGAAGTGGACAAAGCAAGCTTTC
TAGACCAT
BO23314.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:23:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18643-RB | 477 | CG18643-PB | 1..474 | 17..490 | 2370 | 100 | Plus |
CG18643-RC | 138 | CG18643-PC | 1..134 | 17..150 | 670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:23:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18643-RB | 524 | CG18643-RB | 22..495 | 17..490 | 2370 | 100 | Plus |
CG18643-RC | 528 | CG18643-RC | 22..499 | 17..490 | 2295 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:23:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11430339..11430571 | 151..383 | 1165 | 100 | Plus |
3R | 32079331 | 3R | 11430625..11430733 | 382..490 | 545 | 100 | Plus |
3R | 32079331 | 3R | 11430179..11430270 | 59..150 | 460 | 100 | Plus |
3R | 32079331 | 3R | 11430082..11430124 | 17..59 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:23:45 has no hits.
BO23314.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-06 11:42:07 Download gff for
BO23314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18643-RA | 1..373 | 17..389 | 99 | == | Plus |
CG18643-RA | 374..459 | 405..492 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:25 Download gff for
BO23314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18643-RB | 22..495 | 17..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:40 Download gff for
BO23314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18643-RB | 22..495 | 17..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:10:19 Download gff for
BO23314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18643-RB | 22..495 | 17..492 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:10:19 Download gff for
BO23314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11430082..11430124 | 17..59 | 100 | -> | Plus |
3R | 11430180..11430270 | 60..150 | 100 | -> | Plus |
3R | 11430339..11430571 | 151..383 | 100 | -> | Plus |
3R | 11430627..11430733 | 384..492 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:40 Download gff for
BO23314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7255804..7255846 | 17..59 | 100 | -> | Plus |
arm_3R | 7255902..7255992 | 60..150 | 100 | -> | Plus |
arm_3R | 7256061..7256293 | 151..383 | 100 | -> | Plus |
arm_3R | 7256349..7256455 | 384..492 | 98 | | Plus |
BO23314.pep Sequence
Translation from 16 to 508
> BO23314.pep
MRAVIQRVKAAKVTVLDELVSSIGPGLCVLVGIKASDTAKDVEYLVRKIL
ALRLFEEEGKRWQKSVKDLNLELLCVSQFTLYHRLKGNKPDFLAAMKGEE
AQELYNQFLDRLGQSYDSTKIKDGKFGAYMQVHIENDGPVTINLESPEQK
DTDREVDKASFLDH
BO23314.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18643-PB | 158 | CG18643-PB | 1..158 | 1..158 | 802 | 100 | Plus |
CG18643-PC | 45 | CG18643-PC | 1..45 | 1..45 | 215 | 100 | Plus |