Clone BO23314 Report

Search the DGRC for BO23314

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptCG18643-RB
Protein status:BO23314.pep: Imported from assembly
Sequenced Size:508

Clone Sequence Records

BO23314.complete Sequence

508 bp assembled on 2012-04-24

GenBank Submission: KX799704

> BO23314.complete
GAAGTTATCAGTCGACATGCGTGCGGTTATACAAAGGGTTAAGGCTGCCA
AAGTGACGGTGTTGGATGAGCTGGTGTCCTCCATTGGACCAGGCCTGTGC
GTGCTGGTGGGAATCAAGGCCAGCGACACCGCCAAGGATGTTGAGTATCT
TGTCCGGAAAATCTTGGCTCTCCGTTTATTCGAGGAGGAGGGCAAGCGTT
GGCAAAAGTCCGTGAAGGATCTGAACCTAGAACTGCTGTGCGTCTCGCAG
TTTACACTGTATCACCGCCTTAAGGGCAACAAACCGGATTTTTTGGCTGC
CATGAAGGGCGAGGAGGCGCAGGAGTTGTACAATCAATTTTTGGATCGCC
TAGGTCAATCCTACGATAGCACCAAGATTAAAGATGGCAAATTTGGAGCA
TACATGCAAGTGCACATAGAAAACGATGGACCCGTAACCATTAATTTGGA
GTCCCCCGAACAAAAGGATACTGACAGAGAAGTGGACAAAGCAAGCTTTC
TAGACCAT

BO23314.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:23:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG18643-RB 477 CG18643-PB 1..474 17..490 2370 100 Plus
CG18643-RC 138 CG18643-PC 1..134 17..150 670 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:23:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG18643-RB 524 CG18643-RB 22..495 17..490 2370 100 Plus
CG18643-RC 528 CG18643-RC 22..499 17..490 2295 99.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:23:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11430339..11430571 151..383 1165 100 Plus
3R 32079331 3R 11430625..11430733 382..490 545 100 Plus
3R 32079331 3R 11430179..11430270 59..150 460 100 Plus
3R 32079331 3R 11430082..11430124 17..59 215 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:23:45 has no hits.

BO23314.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-06 11:42:07 Download gff for BO23314.complete
Subject Subject Range Query Range Percent Splice Strand
CG18643-RA 1..373 17..389 99 == Plus
CG18643-RA 374..459 405..492 97   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:25 Download gff for BO23314.complete
Subject Subject Range Query Range Percent Splice Strand
CG18643-RB 22..495 17..492 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:40 Download gff for BO23314.complete
Subject Subject Range Query Range Percent Splice Strand
CG18643-RB 22..495 17..492 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:10:19 Download gff for BO23314.complete
Subject Subject Range Query Range Percent Splice Strand
CG18643-RB 22..495 17..492 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:10:19 Download gff for BO23314.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11430082..11430124 17..59 100 -> Plus
3R 11430180..11430270 60..150 100 -> Plus
3R 11430339..11430571 151..383 100 -> Plus
3R 11430627..11430733 384..492 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:40 Download gff for BO23314.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7255804..7255846 17..59 100 -> Plus
arm_3R 7255902..7255992 60..150 100 -> Plus
arm_3R 7256061..7256293 151..383 100 -> Plus
arm_3R 7256349..7256455 384..492 98   Plus

BO23314.pep Sequence

Translation from 16 to 508

> BO23314.pep
MRAVIQRVKAAKVTVLDELVSSIGPGLCVLVGIKASDTAKDVEYLVRKIL
ALRLFEEEGKRWQKSVKDLNLELLCVSQFTLYHRLKGNKPDFLAAMKGEE
AQELYNQFLDRLGQSYDSTKIKDGKFGAYMQVHIENDGPVTINLESPEQK
DTDREVDKASFLDH

BO23314.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG18643-PB 158 CG18643-PB 1..158 1..158 802 100 Plus
CG18643-PC 45 CG18643-PC 1..45 1..45 215 100 Plus