Clone BO23315 Report

Search the DGRC for BO23315

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCG34445-RA
Protein status:BO23315.pep: Imported from assembly
Sequenced Size:436

Clone Sequence Records

BO23315.complete Sequence

436 bp assembled on 2010-03-31

GenBank Submission: KX795036

> BO23315.complete
GAAGTTATCAGTCGACATGACGACAACGCTGCCGGAGAAGGAAGCGGAAA
CGCAGCAGGAGATCAGGGAGCGGGAGGCCAAGGCTCTGGAGGACCGAAAG
GAGCGCAAGATCTACGAGAACTTTGCCACGCCCCTGGCAGGCACTTTTCT
CAACCTGCCACGCGAGCCCGTGGAGATCGAGTGCCCCGCCTGCGGAATCA
AGGATCTGAGTGTGGTGCAAAATGATCTGAAGTGGTGGGCCAGTGAACTA
AACCGCATTGTGGGATGTCTTTTTGTGACCTTCTGCTGCTGCTGCTGCTT
TAATTACTATGTGCCGTGCAAACAAACCGATCGAAGTCATTACTGCGGCA
ATTGCGGCTGTTACTTTGGACGTTCCATGAAGAGGAGGCAACCACTCAAA
TTGAAGGCAACCACCGCCGCAAGCTTTCTAGACCAT

BO23315.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:47:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG34445-RA 405 CG34445-PA 1..402 17..418 2010 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:47:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG34445-RA 527 CG34445-RA 25..427 16..418 2015 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:47:52
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22648193..22648454 277..16 1310 100 Minus
2R 25286936 2R 22647992..22648133 418..277 710 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:47:53 has no hits.

BO23315.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:45 Download gff for BO23315.complete
Subject Subject Range Query Range Percent Splice Strand
CG34445-RA 21..422 17..420 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:53 Download gff for BO23315.complete
Subject Subject Range Query Range Percent Splice Strand
CG34445-RA 26..427 17..420 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:30 Download gff for BO23315.complete
Subject Subject Range Query Range Percent Splice Strand
CG34445-RA 26..427 17..420 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:30 Download gff for BO23315.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22647990..22648133 277..420 98 <- Minus
2R 22648194..22648453 17..276 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:53 Download gff for BO23315.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18535495..18535638 277..420 98 <- Minus
arm_2R 18535699..18535958 17..276 100   Minus

BO23315.pep Sequence

Translation from 16 to 436

> BO23315.pep
MTTTLPEKEAETQQEIREREAKALEDRKERKIYENFATPLAGTFLNLPRE
PVEIECPACGIKDLSVVQNDLKWWASELNRIVGCLFVTFCCCCCFNYYVP
CKQTDRSHYCGNCGCYFGRSMKRRQPLKLKATTAASFLDH

BO23315.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:43:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG34445-PA 134 CG34445-PA 1..134 1..134 744 100 Plus