BO23317.complete Sequence
460 bp assembled on 2010-03-31
GenBank Submission: KX799053
> BO23317.complete
GAAGTTATCAGTCGACATGGAAAAGGCAGCTGGTTTTGTTATTTTTCGCC
GCCTTTGTGGGGAAATACAATACCTATTGCTGAAGGCTTCCTACGGCTCC
TTCCACTGGAGTTCTCCCAAGGGACATGTGGACCCAGGCGAGGATGATTT
TACCACTGCCCTGCGAGAAACGAAAGAGGAAGCCGGGTACGACGAGAAGG
ATCTGATCATATACAAGGACACTCCGCTGACCCTGAATTATCAGGTGCAA
GACAAGCCGAAGATTGTTATTTACTGGCTAGCGGAGCTGCGGAATCCCTG
CCAGGAGCCCATTCTCTCCGAGGAGCACACCGACCTCAAGTGGCTGCCCA
AGGAGGAGGCCAAGCAGTGCGTCGGCTTTAAGGATAACCAAGTCATGATC
GACAAGTTCCACCAAATGATTTTAGATCAAAACAAACCAATGGCAAGCTT
TCTAGACCAT
BO23317.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:35:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Apf-RA | 429 | CG31713-PA | 1..426 | 17..442 | 2130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:35:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Apf-RA | 555 | CG31713-RA | 51..478 | 15..442 | 2140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:35:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9938255..9938511 | 442..186 | 1285 | 100 | Minus |
2L | 23513712 | 2L | 9938568..9938740 | 187..15 | 865 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:35:37 has no hits.
BO23317.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:29 Download gff for
BO23317.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Apf-RA | 50..475 | 17..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:18:35 Download gff for
BO23317.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Apf-RA | 53..478 | 17..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:13:34 Download gff for
BO23317.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Apf-RA | 53..478 | 17..444 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:13:34 Download gff for
BO23317.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9938252..9938510 | 187..444 | 99 | <- | Minus |
2L | 9938565..9938738 | 17..186 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:18:35 Download gff for
BO23317.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9938252..9938510 | 187..444 | 99 | <- | Minus |
arm_2L | 9938565..9938738 | 17..186 | 97 | | Minus |
BO23317.pep Sequence
Translation from 16 to 460
> BO23317.pep
MEKAAGFVIFRRLCGEIQYLLLKASYGSFHWSSPKGHVDPGEDDFTTALR
ETKEEAGYDEKDLIIYKDTPLTLNYQVQDKPKIVIYWLAELRNPCQEPIL
SEEHTDLKWLPKEEAKQCVGFKDNQVMIDKFHQMILDQNKPMASFLDH
BO23317.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:43:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Apf-PA | 142 | CG31713-PA | 1..142 | 1..142 | 767 | 100 | Plus |