BO23319.complete Sequence
562 bp assembled on 2010-03-31
GenBank Submission: KX797693
> BO23319.complete
GAAGTTATCAGTCGACATGCCCCGCCAACGTTCGGAAGGGCCGCGATCCA
CAGGATCTATGCGGCGCCAAAGCAGCCGGAGCAGCCATGTCTTCGCCACA
AAGCCGTCTCGTGGGAGCAGCAAGGATCTGCCGGCTGTGCAGCAGCCCAA
GAAGGAATCCCTGCCAGCTGCAGCTCCTGCTGCCTCGGCAGCCACCTCCA
CAGAGACAAAAGGTCCTAGCACAGCAGATAGGTTCAAGGACATGGCCACC
ACGGCGGCTGGCGTGGCAGCAGGATCAGCTGTGGGCCACGCTGTGGGCGC
AGGACTCACGGGAATGTTCCAGGGACGTGGTCAGGCAGCCCCGGCCAAGG
AGCAGCCTCAACAGGAGGGATCCTTGGCAGCTTCAGCTTCGCAATCAGTA
CCGAAACCTCAACTAGTGGAGGATGGTCCCTGCGCCTTCGAGCTGAGGCA
GTTCCTCAAGTGCACCGAGGACAACAGCAGTGATCTCTCCGTTTGCAAGG
AGTTTAACGAGGCAATGCAGCAGTGTCGGCGGCGCTATAATGTCGCAAGC
TTTCTAGACCAT
BO23319.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:28:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31007-RA | 531 | CG31007-PA | 1..528 | 17..544 | 2640 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:28:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31007-RA | 758 | CG31007-RA | 41..568 | 17..544 | 2640 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:28:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30991890..30992417 | 544..17 | 2640 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:28:21 has no hits.
BO23319.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:31 Download gff for
BO23319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31007-RA | 41..568 | 17..546 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:15:56 Download gff for
BO23319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31007-RA | 41..568 | 17..546 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:11:21 Download gff for
BO23319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31007-RA | 41..568 | 17..546 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:11:21 Download gff for
BO23319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30991887..30992417 | 17..546 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:15:56 Download gff for
BO23319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26817609..26818139 | 17..546 | 99 | | Minus |
BO23319.pep Sequence
Translation from 16 to 562
> BO23319.pep
MPRQRSEGPRSTGSMRRQSSRSSHVFATKPSRGSSKDLPAVQQPKKESLP
AAAPAASAATSTETKGPSTADRFKDMATTAAGVAAGSAVGHAVGAGLTGM
FQGRGQAAPAKEQPQQEGSLAASASQSVPKPQLVEDGPCAFELRQFLKCT
EDNSSDLSVCKEFNEAMQQCRRRYNVASFLDH
BO23319.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:44:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31007-PA | 176 | CG31007-PA | 1..176 | 1..176 | 894 | 100 | Plus |
| CG31008-PA | 114 | CG31008-PA | 32..114 | 73..176 | 255 | 51 | Plus |
| CG5010-PA | 170 | CG5010-PA | 42..169 | 48..176 | 232 | 37.4 | Plus |
| CG5010-PB | 122 | CG5010-PB | 13..121 | 67..176 | 215 | 40 | Plus |
