BO23322.complete Sequence
499 bp assembled on 2010-03-31
GenBank Submission: KX796782
> BO23322.complete
GAAGTTATCAGTCGACATGGAGCTCTCGTTGGATGAACCGCAATGCGCAT
CCTTCTTTTGCATCCTGGGTGCCGTGTGCGCCATTGTCTTTTCGACATTG
GGAGCCGCCTACGGAACAGCGAAGGCTTCTGTGGGAATCTCTTCGATGTC
AATCAAGCATCCGCAGCTGATCATGAAGGCGATTGTTCCAGTGGTTATGG
CTGGCATTATAGCCATTTATGGACTGGTGATCGCGGTCCTGCTTGCTGGA
TCACTTAGCAGCCCCTATAGCGCCTACAAGGGTTTCCTAAACCTCAGTGC
TGGACTGGCGGTGGGAGTCTCTGGGATGGGGGCTGGAATTGCTATTGGCG
TGGTGGGCGAAGCTGGAGTCCGTGCATCTGCCCAGCAGCCAAAACTCTTT
GTGGCCATCATTTTAATATTGATATTTGCCGAGGTCTTGGGTCTGTATGG
TCTCATAGTGGCCATTTATTTGTTTTCCAAGGCAAGCTTTCTAGACCAT
BO23322.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:50:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vha16-4-RA | 468 | CG9013-PA | 1..465 | 17..481 | 2325 | 100 | Plus |
Vha16-3-RB | 477 | CG32090-PB | 320..461 | 327..468 | 215 | 76.8 | Plus |
Vha16-3-RA | 477 | CG32090-PA | 320..461 | 327..468 | 215 | 76.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:50:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vha16-4-RA | 567 | CG9013-RA | 47..511 | 17..481 | 2325 | 100 | Plus |
Vha16-3-RB | 633 | CG32090-RB | 388..529 | 327..468 | 215 | 76.8 | Plus |
Vha16-3-RA | 587 | CG32090-RA | 342..483 | 327..468 | 215 | 76.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:50:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16947714..16948178 | 481..17 | 2325 | 100 | Minus |
3L | 28110227 | 3L | 11473727..11473868 | 327..468 | 215 | 76.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:50:02 has no hits.
BO23322.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:37 Download gff for
BO23322.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9013-RA | 1..465 | 17..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:59 Download gff for
BO23322.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vha16-4-RA | 47..511 | 17..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:32:41 Download gff for
BO23322.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vha16-4-RA | 47..511 | 17..483 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:32:41 Download gff for
BO23322.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16947712..16948178 | 17..483 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:59 Download gff for
BO23322.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12835217..12835683 | 17..483 | 99 | | Minus |
BO23322.pep Sequence
Translation from 16 to 499
> BO23322.pep
MELSLDEPQCASFFCILGAVCAIVFSTLGAAYGTAKASVGISSMSIKHPQ
LIMKAIVPVVMAGIIAIYGLVIAVLLAGSLSSPYSAYKGFLNLSAGLAVG
VSGMGAGIAIGVVGEAGVRASAQQPKLFVAIILILIFAEVLGLYGLIVAI
YLFSKASFLDH
BO23322.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:44:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vha16-4-PA | 155 | CG9013-PA | 1..155 | 1..155 | 748 | 100 | Plus |
Vha16-1-PB | 159 | CG3161-PB | 4..159 | 2..155 | 536 | 67.9 | Plus |
Vha16-1-PA | 159 | CG3161-PA | 4..159 | 2..155 | 536 | 67.9 | Plus |
Vha16-1-PD | 159 | CG3161-PD | 4..159 | 2..155 | 536 | 67.9 | Plus |
Vha16-1-PC | 159 | CG3161-PC | 4..159 | 2..155 | 536 | 67.9 | Plus |