Clone BO23327 Report

Search the DGRC for BO23327

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:27
Vector:pDNR-Dual
Associated Gene/TranscriptCG12848-RA
Protein status:BO23327.pep: Imported from assembly
Sequenced Size:394

Clone Sequence Records

BO23327.complete Sequence

394 bp assembled on 2010-03-31

GenBank Submission: KX798397

> BO23327.complete
GAAGTTATCAGTCGACATGCGCGTACCCGGAGCCCTGTTTGCCGCGCGCG
GCCGAGCGCCTCAAAGCGAGAAGGACGTGCCCTTCCAGGAGATTCTGCCT
CTGCGGCTGAAGAACACCGTGAGCGGGAAGGCGGACTCCGGATCCGATGT
GGCCTGTCTCCAGGAGATGGGCGTGCTGTTCGCCTGCTTGAAAGACAACG
AATTCGTGGAGAAGTACTGCCACAAGGAGATCAGCCAGTTCCAGAACTGC
TACAAGTGCTACATGGACCGTAAGTTTGAGGCGAAGAAGACCGTGAACCA
GGGAATCGTCCAACCGGGCAGCAACCTGAACTACAAGCAACTTAACAAGT
ACATGCGCCGCTACCCCAATCCCGTAGCAAGCTTTCTAGACCAT

BO23327.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:43:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG12848-RB 363 CG12848-PB 1..360 17..376 1800 100 Plus
CG12848-RA 363 CG12848-PA 1..360 17..376 1800 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:43:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG12848-RA 469 CG12848-RA 59..422 13..376 1805 99.7 Plus
CG12848-RB 478 CG12848-RB 72..431 17..376 1800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:43:29
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24762613..24762972 376..17 1800 100 Minus
Blast to na_te.dros performed on 2014-11-27 01:43:30 has no hits.

BO23327.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:39 Download gff for BO23327.complete
Subject Subject Range Query Range Percent Splice Strand
CG12848-RA 51..410 17..378 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:00:27 Download gff for BO23327.complete
Subject Subject Range Query Range Percent Splice Strand
CG12848-RA 63..422 17..378 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:30:39 Download gff for BO23327.complete
Subject Subject Range Query Range Percent Splice Strand
CG12848-RA 63..422 17..378 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:30:39 Download gff for BO23327.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24762609..24762972 17..378 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:00:27 Download gff for BO23327.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20650132..20650495 17..378 99   Minus

BO23327.pep Sequence

Translation from 16 to 394

> BO23327.pep
MRVPGALFAARGRAPQSEKDVPFQEILPLRLKNTVSGKADSGSDVACLQE
MGVLFACLKDNEFVEKYCHKEISQFQNCYKCYMDRKFEAKKTVNQGIVQP
GSNLNYKQLNKYMRRYPNPVASFLDH

BO23327.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:44:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG12848-PB 120 CG12848-PB 1..120 1..120 640 100 Plus
CG12848-PA 120 CG12848-PA 1..120 1..120 640 100 Plus