Clone BO23331 Report

Search the DGRC for BO23331

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptCG15649-RA
Protein status:BO23331.pep: Imported from assembly
Sequenced Size:391

Clone Sequence Records

BO23331.complete Sequence

391 bp assembled on 2010-03-31

GenBank Submission: KX796022

> BO23331.complete
GAAGTTATCAGTCGACATGTTACACCTGAGATTTGTCTTTATGGCCGCTT
TACCGCTGCTGCTGTTGCTTCTACTTCAGTTTAGTCCACCTGCAGATGGC
TTTATCATTCGACTGATTACGGAGACACTGCAGAATAACGTGGCTGGTGA
GCCGGTTCTTCACGAGCGGACTTCTTGGGACTTTGATCCGGAGGCGGCCA
AGAGGGCCAGATCGCTGTACTACGAGAAGAACGGATTCCGCTCGTCCAAA
TTCATCGAGCGACTGGGCGTTGGTCTGGATGGGCGGCACGAGGAGCGGCG
GGCGGAGCAAGGACATCGCGATGTGGGACGACTGAATGGGGAACACAATG
TGAACTATCCGCCTCCACCGGCTGCAAGCTTTCTAGACCAT

BO23331.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:40:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG15649-RB 360 CG15649-PB 1..357 17..373 1785 100 Plus
CG15649-RA 360 CG15649-PA 1..357 17..373 1785 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:40:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG15649-RB 766 CG15649-RB 78..434 17..373 1785 100 Plus
CG15649-RA 462 CG15649-RA 78..434 17..373 1785 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:40:38
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20973458..20973634 226..50 885 100 Minus
2R 25286936 2R 20973248..20973396 373..225 745 100 Minus
Blast to na_te.dros performed 2014-11-27 01:40:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2806..2877 81..8 104 62.2 Minus

BO23331.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:40 Download gff for BO23331.complete
Subject Subject Range Query Range Percent Splice Strand
CG15649-RA 58..409 22..375 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:59:30 Download gff for BO23331.complete
Subject Subject Range Query Range Percent Splice Strand
CG15649-RA 83..434 22..375 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:29:55 Download gff for BO23331.complete
Subject Subject Range Query Range Percent Splice Strand
CG15649-RA 83..434 22..375 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:29:55 Download gff for BO23331.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20973458..20973634 50..226 100 <- Minus
2R 20973908..20973935 22..49 100   Minus
2R 20973244..20973394 227..375 98 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:59:30 Download gff for BO23331.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16860963..16861139 50..226 100 <- Minus
arm_2R 16861413..16861440 22..49 100   Minus
arm_2R 16860749..16860899 227..375 98 <- Minus

BO23331.pep Sequence

Translation from 16 to 391

> BO23331.pep
MLHLRFVFMAALPLLLLLLLQFSPPADGFIIRLITETLQNNVAGEPVLHE
RTSWDFDPEAAKRARSLYYEKNGFRSSKFIERLGVGLDGRHEERRAEQGH
RDVGRLNGEHNVNYPPPPAASFLDH

BO23331.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:44:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG15649-PB 119 CG15649-PB 1..119 1..119 626 100 Plus
CG15649-PA 119 CG15649-PA 1..119 1..119 626 100 Plus