BO23333.complete Sequence
826 bp assembled on 2010-03-31
GenBank Submission: KX795175
> BO23333.complete
GAAGTTATCAGTCGACATGACGCCTGCAATCGTTCTGCTGACTTTTTTAG
TAATCCTAACCCTGGGATCTTATGGATATTCGCAGCTATTGGATTCAAAA
TGCATTGCATTGTTTCGAATAAGAGTAATTGGTGGTCAGAATGCTCGAAG
GACTCCATGGATGGCTTACTTGATACGAGATAACAGATTCGCATGTGGCG
GCTCACTGATTGCCTACCGCTTTGTTCTAACCGCTGCCCATTGTACGAAA
ATCAACGACAACTTATTTGTTAGATTGGGTGAATACGATTCGTCGAGGAC
AACGGATGGACAGACTAGAAGCTACAGAGTTGTTTCAATATATCGTCATA
AAAACTATATAGATTTTCGAAACCATGATATTGCTGTGCTCAAACTGGAT
CGCCAAGTCGTCTACGATGCTTATATACGACCAATTTGCATTCTTTTAAA
TTCCGGCTTGCAGTCCCTTGCAAACAGCATACAGAATTTTACTTTAACTG
GCTGGGGTCAGATGGCCCACTATTACAAGATGCCAACTACACTGCAGGAA
ATGTCCCTGCGCCGTGTTAGAAATGAGTATTGCGGTGTTCCGAGTCTTTC
CATATGTTGCTGGAATCCCGTGCAGTACGCCTGCTTTGGAGATTCAGGCG
GTCCATTGGGGTCACTTGTGAAATACGGACATAAAACCATATATGTTCAG
TTTGGAGTAACCAACTCCGTGACGGGCAATTGTGATGGCTACAGCTCATA
TTTGGATCTCATGAGCTATATGCCCTGGCTTTACCAAACCTTGTTAAGAA
ACTGGGTCGCAAGCTTTCTAGACCAT
BO23333.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:38:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30098-RA | 795 | CG30098-PA | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:38:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30098-RA | 809 | CG30098-RA | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:38:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16354241..16354630 | 808..419 | 1950 | 100 | Minus |
| 2R | 25286936 | 2R | 16355013..16355215 | 219..17 | 1015 | 100 | Minus |
| 2R | 25286936 | 2R | 16354694..16354848 | 419..265 | 775 | 100 | Minus |
| 2R | 25286936 | 2R | 16354906..16354951 | 264..219 | 230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:38:30 has no hits.
BO23333.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:42 Download gff for
BO23333.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30098-RA | 1..792 | 17..810 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:58:43 Download gff for
BO23333.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30098-RA | 1..792 | 17..810 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:29:21 Download gff for
BO23333.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30098-RA | 1..792 | 17..810 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:29:21 Download gff for
BO23333.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16354239..16354629 | 420..810 | 99 | <- | Minus |
| 2R | 16354694..16354848 | 265..419 | 100 | <- | Minus |
| 2R | 16354906..16354951 | 219..264 | 100 | <- | Minus |
| 2R | 16355014..16355215 | 17..218 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:58:43 Download gff for
BO23333.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12241744..12242134 | 420..810 | 99 | <- | Minus |
| arm_2R | 12242199..12242353 | 265..419 | 100 | <- | Minus |
| arm_2R | 12242411..12242456 | 219..264 | 100 | <- | Minus |
| arm_2R | 12242519..12242720 | 17..218 | 100 | | Minus |
BO23333.pep Sequence
Translation from 16 to 826
> BO23333.pep
MTPAIVLLTFLVILTLGSYGYSQLLDSKCIALFRIRVIGGQNARRTPWMA
YLIRDNRFACGGSLIAYRFVLTAAHCTKINDNLFVRLGEYDSSRTTDGQT
RSYRVVSIYRHKNYIDFRNHDIAVLKLDRQVVYDAYIRPICILLNSGLQS
LANSIQNFTLTGWGQMAHYYKMPTTLQEMSLRRVRNEYCGVPSLSICCWN
PVQYACFGDSGGPLGSLVKYGHKTIYVQFGVTNSVTGNCDGYSSYLDLMS
YMPWLYQTLLRNWVASFLDH
BO23333.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:44:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30098-PA | 264 | CG30098-PA | 1..264 | 1..264 | 1414 | 100 | Plus |
| CG33459-PA | 284 | CG33459-PA | 7..277 | 7..260 | 429 | 37.9 | Plus |
| CG30090-PA | 291 | CG30090-PA | 1..280 | 1..262 | 394 | 35.2 | Plus |
| CG33458-PA | 281 | CG33458-PA | 8..278 | 11..262 | 386 | 35.7 | Plus |
| CG43335-PA | 281 | CG43335-PA | 6..272 | 10..255 | 360 | 35.7 | Plus |
