Clone BO23339 Report

Search the DGRC for BO23339

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:39
Vector:pDNR-Dual
Associated Gene/TranscriptCG32202-RA
Protein status:BO23339.pep: Imported from assembly
Sequenced Size:457

Clone Sequence Records

BO23339.complete Sequence

457 bp assembled on 2010-03-31

GenBank Submission: KX798383

> BO23339.complete
GAAGTTATCAGTCGACATGTTGCTAAATAAGAAAGAACTCATGTACAAAC
AGCTGGTGGAAAAACTGTATGACAGGTGCCAAAGGATTCAGGCGGAAAAT
GAGCGATGTGTGATGAGAGTAAATGGGATCAAAAAGATAGTAAGAAGGCG
CAATCATGACGTGGAGCTTCTAAAACGGCGACTAGATAAGCACGGAGACG
ACTGGCGATCCGTTCCCATGGAGGCTCCACATCCCAAAGGGAAAACCGAG
CAGAAGCGTCGAGGACCGAAGCCCAAAAACAAGCAGGCGGCGGATGAAAC
AGGAGCACCCGGGTCTGAGCCTGGACCCAATACTCCAGCTGCCCGGAAAC
CCCGAAAGCAAAAAGCCAAACAGGCACCCATCAATCCCAATCCAGTCATT
GCACCACCGCATCAACAACCTCAACCTCCACTGTTGACCGCAAGCTTTCT
AGACCAT

BO23339.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:01:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG32202-RA 426 CG32202-PA 1..423 17..439 2115 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:01:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG32202-RA 616 CG32202-RA 94..516 17..439 2115 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:01:45
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18682437..18682760 116..439 1620 100 Plus
3L 28110227 3L 18682277..18682377 17..117 505 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:01:46 has no hits.

BO23339.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:47 Download gff for BO23339.complete
Subject Subject Range Query Range Percent Splice Strand
CG32202-RA 49..466 22..441 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:38:31 Download gff for BO23339.complete
Subject Subject Range Query Range Percent Splice Strand
CG32202-RA 99..516 22..441 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:32:18 Download gff for BO23339.complete
Subject Subject Range Query Range Percent Splice Strand
CG32202-RA 99..516 22..441 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:32:18 Download gff for BO23339.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18682282..18682377 22..117 100 -> Plus
3L 18682439..18682760 118..441 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:38:31 Download gff for BO23339.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18675382..18675477 22..117 100 -> Plus
arm_3L 18675539..18675860 118..441 99   Plus

BO23339.pep Sequence

Translation from 16 to 457

> BO23339.pep
MLLNKKELMYKQLVEKLYDRCQRIQAENERCVMRVNGIKKIVRRRNHDVE
LLKRRLDKHGDDWRSVPMEAPHPKGKTEQKRRGPKPKNKQAADETGAPGS
EPGPNTPAARKPRKQKAKQAPINPNPVIAPPHQQPQPPLLTASFLDH

BO23339.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:56:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG32202-PA 141 CG32202-PA 1..141 1..141 758 100 Plus