BO23340.complete Sequence
601 bp assembled on 2010-03-31
GenBank Submission: KX795458
> BO23340.complete
GAAGTTATCAGTCGACATGAAGAACCAAAAAAATATAACCATTATACTAA
CTGGGCCACCAGGAGTGGGTAAAACTACACTGGTCCACAAAATATGCTCG
GCTCTGCAGGATAGAGGACGCATTCTTCAAGGATTCTACACAGAGGAAAT
GCGAGGTGAGGGCACCAGCCAAAGAATCGGCTTCGACGTGGTCACGTTAG
CCGGAAAACGAGCAATCCTATCTCGCAAGAATCCCGGGGACCAGCTGCGA
CGACCCAAAGTGGGAGAGTATTCGGTGTTTGTGCAGGACTTCGACAGTCT
CGCTCTGCCAGTACTTGGCACACAGGATTCCCAACCAGAGCCGGATCTCC
TGGTCGTGGATGAAGTGGGCAAAATGGAGCTGCTTAGCAAGCGATTTGAG
TCGGCCATGGCTGATCTCCTGAAGAAAAAGCGGGCCCTATTGGTCACCAT
ACCCGAGAAATCAACATTGGCTTTGGTGGAGCAGCTGAGAAAGTCAGCAG
GATCCAAGATTTACCAGGTGACCAAATTCAATAGGAACGCCTTGGCTGGA
GAGATTACAGAAGAGATTACAAAAGCACTTCTTGCAAGCTTTCTAGACCA
T
BO23340.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:01:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10581-RA | 570 | CG10581-PA | 1..567 | 17..583 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:01:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10581-RA | 587 | CG10581-RA | 8..578 | 13..583 | 2855 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:01:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21033563..21034086 | 583..60 | 2620 | 100 | Minus |
3L | 28110227 | 3L | 21034146..21034196 | 63..13 | 255 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 14:01:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
accord | 7404 | accord ACCORD 7404bp | 2727..2764 | 554..591 | 109 | 76.3 | Plus |
BO23340.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:48 Download gff for
BO23340.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10581-RA | 12..578 | 17..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:38:35 Download gff for
BO23340.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10581-RA | 12..578 | 17..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:32:22 Download gff for
BO23340.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10581-RA | 12..578 | 17..585 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:32:22 Download gff for
BO23340.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21033561..21034083 | 63..585 | 99 | <- | Minus |
3L | 21034147..21034192 | 17..62 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:38:35 Download gff for
BO23340.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21026661..21027183 | 63..585 | 99 | <- | Minus |
arm_3L | 21027247..21027292 | 17..62 | 100 | | Minus |
BO23340.pep Sequence
Translation from 16 to 601
> BO23340.pep
MKNQKNITIILTGPPGVGKTTLVHKICSALQDRGRILQGFYTEEMRGEGT
SQRIGFDVVTLAGKRAILSRKNPGDQLRRPKVGEYSVFVQDFDSLALPVL
GTQDSQPEPDLLVVDEVGKMELLSKRFESAMADLLKKKRALLVTIPEKST
LALVEQLRKSAGSKIYQVTKFNRNALAGEITEEITKALLASFLDH
BO23340.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:56:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10581-PA | 189 | CG10581-PA | 1..189 | 1..189 | 937 | 100 | Plus |