BO23342.complete Sequence
799 bp assembled on 2010-03-31
GenBank Submission: KX798826
> BO23342.complete
GAAGTTATCAGTCGACATGATTATCCAGAACAGAAGTCCTCTTATAGGCC
ACATTTTGAGACGGTGCCATCGCCAAGCGGTGGAAAGCAACGCTATAAAA
GCCAATTTAACAGCATATTTTGGAAAATGGCCCGAAACGGAGCAGAAGGA
GTTTCGCCAGCATATGCGCATCATCACGGATTTCATTAGTGAGCCAGAGG
AACAGCAGCTGCACGAGGAGATCGAGCCCTATATGAGCCGTCTGCGCTAC
GAGTTCGATCACTGGGACGATGCCATACACGGTTTTCGGGAGACGGAGCG
AAAGAAGTGGTTCCCTAAAAACAGAGAGATCCTGGAGCGCGTGCGCCAAG
TCGCCTTCGATGGAGCAGTTATGCCCTATGTCCACATCCTAGATCTTGCA
CCCGATGGCGTTATCAAGCCCCATGTGGATAGCACGAGATACTGCGGCAA
CACCATCTCTGGAATCAGCCTACTTAGCGACAGTGTGATGCGACTTGTGC
GCACGGATGAGCAGCGGTACCAACAGCAATCGTCGGGAACTGCAACGGAT
CCGAATTCCCAGGGGTCAGAACCCGATGCAGCCTATCGCCATCAACCGGA
GGCGTCTCTAAAGAACAACTTCTACGCTGACATCCTGTTGCCGCGCCGCT
CCTTGTACATAATGAGCCACACGGCTCGCTACAAATTCACACACGAGATA
CTAGCTAAGGAGCACTCCCAGTTTCAGGGTGCGCTGGTGCCCAGGACACG
TCGCATTTCCATCATTTGTCGCAACGAACCCGCAAGCTTTCTAGACCAT
BO23342.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:02:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14130-RA | 768 | CG14130-PA | 1..765 | 17..781 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:02:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14130-RA | 1067 | CG14130-RA | 57..821 | 17..781 | 3825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:02:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11816123..11816464 | 440..781 | 1710 | 100 | Plus |
3L | 28110227 | 3L | 11815626..11815823 | 75..272 | 990 | 100 | Plus |
3L | 28110227 | 3L | 11815891..11816058 | 272..439 | 840 | 100 | Plus |
3L | 28110227 | 3L | 11815500..11815560 | 17..77 | 305 | 100 | Plus |
3L | 28110227 | 3L | 11837713..11837764 | 626..575 | 185 | 90.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:02:06 has no hits.
BO23342.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:50 Download gff for
BO23342.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14130-RA | 22..786 | 17..783 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:38:40 Download gff for
BO23342.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14130-RA | 22..786 | 17..783 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:32:25 Download gff for
BO23342.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14130-RA | 57..821 | 17..783 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:32:25 Download gff for
BO23342.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11815500..11815560 | 17..77 | 100 | -> | Plus |
3L | 11815629..11815822 | 78..271 | 100 | -> | Plus |
3L | 11815891..11816058 | 272..439 | 100 | -> | Plus |
3L | 11816123..11816464 | 440..783 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:38:40 Download gff for
BO23342.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11808600..11808660 | 17..77 | 100 | -> | Plus |
arm_3L | 11808729..11808922 | 78..271 | 100 | -> | Plus |
arm_3L | 11808991..11809158 | 272..439 | 100 | -> | Plus |
arm_3L | 11809223..11809564 | 440..783 | 99 | | Plus |
BO23342.pep Sequence
Translation from 16 to 799
> BO23342.pep
MIIQNRSPLIGHILRRCHRQAVESNAIKANLTAYFGKWPETEQKEFRQHM
RIITDFISEPEEQQLHEEIEPYMSRLRYEFDHWDDAIHGFRETERKKWFP
KNREILERVRQVAFDGAVMPYVHILDLAPDGVIKPHVDSTRYCGNTISGI
SLLSDSVMRLVRTDEQRYQQQSSGTATDPNSQGSEPDAAYRHQPEASLKN
NFYADILLPRRSLYIMSHTARYKFTHEILAKEHSQFQGALVPRTRRISII
CRNEPASFLDH
BO23342.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:56:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14130-PA | 255 | CG14130-PA | 1..255 | 1..255 | 1349 | 100 | Plus |