Clone BO23345 Report

Search the DGRC for BO23345

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG13538-RA
Protein status:BO23345.pep: Imported from assembly
Sequenced Size:604

Clone Sequence Records

BO23345.complete Sequence

604 bp assembled on 2010-03-31

GenBank Submission: KX796144

> BO23345.complete
GAAGTTATCAGTCGACATGATGTTGGCCGATGAATTTGAAACGATGTGCA
AGAATTATTTTGTAAATTCCATGACTCACGTCTGCTCGTCCCTCGTCCCG
GAATCGCTGACCAAGAAGTATCGCAATCGGCTGATCATTCCCAAGGATCC
CTACAGTATCTTCAAGCTGAACAGCCGGAATTCCAGCTATCTCCTCGCCT
TCCGCTTCCCGGAAATGCGCAATTGCCGAAAACTCTGGATGTCGGATTTG
CGCAATCTAAATTGCGAGATTAAAGGCGGCAAAATGAAGAACTTCTTCTT
CGCCAATAGCTACCGCAAGTGCTACAACTTTGCCATGGACCTAACCTCGG
AGCTAAAGGCGCACTGCGGCGCCAAGAACAATGAGGAGGATACGCAGTCG
GGCTACTACTACACGAACTTCGACGGGAATCCGGTCATTCAGACCAACTC
AACTGCTTGTCTTTTGCTGGGAACTTCAACTCTGGTACTCTGCCTGATCA
TCTCGTTTCTAATGTTCGCCATTCTGCAATGGAAGGCATCTCGGCTGCGA
GGCAGCAAGTCAGTCCAAGGCGGTCCATGTGAATCCGCAAGCTTTCTAGA
CCAT

BO23345.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:02:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG13538-RA 573 CG13538-PA 1..570 17..586 2850 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:02:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG13538-RA 989 CG13538-RA 87..659 14..586 2865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:02:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23087263..23087835 14..586 2865 100 Plus
Blast to na_te.dros performed 2014-11-27 14:02:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dkoe\Gandalf 979 Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). 44..88 35..79 117 73.3 Plus

BO23345.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:55 Download gff for BO23345.complete
Subject Subject Range Query Range Percent Splice Strand
CG13538-RA 5..574 17..588 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:38:50 Download gff for BO23345.complete
Subject Subject Range Query Range Percent Splice Strand
CG13538-RA 90..659 17..588 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:32:30 Download gff for BO23345.complete
Subject Subject Range Query Range Percent Splice Strand
CG13538-RA 90..659 17..588 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:32:30 Download gff for BO23345.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23087266..23087835 17..588 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:38:50 Download gff for BO23345.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18974789..18975358 17..588 99   Plus

BO23345.pep Sequence

Translation from 16 to 604

> BO23345.pep
MMLADEFETMCKNYFVNSMTHVCSSLVPESLTKKYRNRLIIPKDPYSIFK
LNSRNSSYLLAFRFPEMRNCRKLWMSDLRNLNCEIKGGKMKNFFFANSYR
KCYNFAMDLTSELKAHCGAKNNEEDTQSGYYYTNFDGNPVIQTNSTACLL
LGTSTLVLCLIISFLMFAILQWKASRLRGSKSVQGGPCESASFLDH

BO23345.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:56:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG13538-PA 190 CG13538-PA 1..190 1..190 1014 100 Plus