Clone BO23347 Report

Search the DGRC for BO23347

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:47
Vector:pDNR-Dual
Associated Gene/TranscriptCG14247-RA
Protein status:BO23347.pep: Imported from assembly
Sequenced Size:592

Clone Sequence Records

BO23347.complete Sequence

592 bp assembled on 2010-03-31

GenBank Submission: KX795552

> BO23347.complete
GAAGTTATCAGTCGACATGCTCCGTTGGCTGTTCGTGATGAAATTATTTA
TGAAAAATAAATGGAGTAACTTCCCCCGGATTCTGCTCCTGATCCTGATC
CTGACCATGCTGCAGCTGCTGCAGCAGGGTGTGGCAGCCACCACCGACCC
TGACACAACCACGAATGCAACATGCAGACATGCCACGGACATGTGGGGAG
ATCCGGACCCCAACATATTCTACGTGTGCTCCGATGGCGGACAACCGCTG
CAGCTGGAGTGTCCGCCTGGCCGGGGATTTTTCAGCGGTCTCGGTTATCT
GGGCTGTTTGCCCTATGACCACTGGCCAGCCTGCCGCCCCTCGGAGGAGC
AGGTGGCCGCCCAATTGTCAGCTGGCTGTGACACCACTACCGGCATCGTG
CCATCGCCCTGGGCCTCGCCGGATCCCAACCGATTCTACCTGTGTCCCAG
CATAAATGCCACACCTCTGCTGCTCAACTGCGCCGCCGGTAGTGGATTCG
TGTCCAGTTCCGAGGTGGTGGGCTGTGCGGACTGGTCACAATGGCGCCGC
CAGATGGAGTGCGAGGCGTACTACGCAAGCTTTCTAGACCAT

BO23347.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:03:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG14247-RA 561 CG14247-PA 1..558 17..574 2790 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:03:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG14247-RA 984 CG14247-RA 200..757 17..574 2790 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26737809..26738366 17..574 2790 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:03:09 has no hits.

BO23347.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:57 Download gff for BO23347.complete
Subject Subject Range Query Range Percent Splice Strand
CG14247-RA 184..741 17..576 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:39:06 Download gff for BO23347.complete
Subject Subject Range Query Range Percent Splice Strand
CG14247-RA 184..741 17..576 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:32:42 Download gff for BO23347.complete
Subject Subject Range Query Range Percent Splice Strand
CG14247-RA 200..757 17..576 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:32:42 Download gff for BO23347.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26737809..26738366 17..576 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:39:06 Download gff for BO23347.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22563531..22564088 17..576 99   Plus

BO23347.pep Sequence

Translation from 16 to 592

> BO23347.pep
MLRWLFVMKLFMKNKWSNFPRILLLILILTMLQLLQQGVAATTDPDTTTN
ATCRHATDMWGDPDPNIFYVCSDGGQPLQLECPPGRGFFSGLGYLGCLPY
DHWPACRPSEEQVAAQLSAGCDTTTGIVPSPWASPDPNRFYLCPSINATP
LLLNCAAGSGFVSSSEVVGCADWSQWRRQMECEAYYASFLDH

BO23347.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:57:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG14247-PA 186 CG14247-PA 1..186 1..186 1039 100 Plus
CG6403-PB 153 CG6403-PB 1..150 24..182 195 32.5 Plus
CG6403-PA 153 CG6403-PA 1..150 24..182 195 32.5 Plus