Clone BO23349 Report

Search the DGRC for BO23349

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG15471-RB
Protein status:BO23349.pep: Imported from assembly
Sequenced Size:418

Clone Sequence Records

BO23349.complete Sequence

418 bp assembled on 2010-03-31

GenBank Submission: KX797205

> BO23349.complete
GAAGTTATCAGTCGACATGGCCAGCCTGACGGAAGATCGGGGTCCCAATA
TCTGCAACTGTAGTCGAATGCGATCCGAGTGCTGGACAAGACATTCGATC
ACCGCCGAGGACACGATGACTCGTCTGGCTTTAAAGTACGACACGAGCAT
TGGGCGCATATGCAGGGCCAATCGAATGCACAGCCAGGATGTCCTGCAGG
CACGCCGTCACGTTTGGGTGCCCATTCCAAACAGTCAGTTTCAGATGGGG
TGTCAAGAGAAATCAGAGTCCGACGAAAGTCCGGAGATCTCTATCAGAAA
AGTTACGCCGAACTTGCCGTCACATTTTTATCGCCAAAGCGATCCAAATC
CAAATCCTTTTGCTTGCGATGACGATCCGCTGCTGGTCATCACAGATATG
GCAAGCTTTCTAGACCAT

BO23349.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:42:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG15471-RC 387 CG15471-PC 1..384 17..400 1920 100 Plus
CG15471-RB 387 CG15471-PB 1..384 17..400 1920 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:42:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG15471-RC 528 CG15471-RC 56..439 17..400 1920 100 Plus
CG15471-RB 535 CG15471-RB 33..416 17..400 1920 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:42:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4782320..4782703 400..17 1920 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:42:04 has no hits.

BO23349.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:49 Download gff for BO23349.complete
Subject Subject Range Query Range Percent Splice Strand
CG15471-RC 56..439 17..402 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:16 Download gff for BO23349.complete
Subject Subject Range Query Range Percent Splice Strand
CG15471-RB 33..416 17..402 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:23:14 Download gff for BO23349.complete
Subject Subject Range Query Range Percent Splice Strand
CG15471-RB 33..416 17..402 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:23:14 Download gff for BO23349.complete
Subject Subject Range Query Range Percent Splice Strand
X 4782318..4782703 17..402 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:16 Download gff for BO23349.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4676351..4676736 17..402 99   Minus

BO23349.pep Sequence

Translation from 16 to 418

> BO23349.pep
MASLTEDRGPNICNCSRMRSECWTRHSITAEDTMTRLALKYDTSIGRICR
ANRMHSQDVLQARRHVWVPIPNSQFQMGCQEKSESDESPEISIRKVTPNL
PSHFYRQSDPNPNPFACDDDPLLVITDMASFLDH

BO23349.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:57:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG15471-PC 128 CG15471-PC 1..128 1..128 696 100 Plus
CG15471-PB 128 CG15471-PB 1..128 1..128 696 100 Plus