BO23350.complete Sequence
487 bp assembled on 2010-03-31
GenBank Submission: KX799118
> BO23350.complete
GAAGTTATCAGTCGACATGCACCCAGGGCAAATTGAGGTCAACGAGATCA
ATGGCTATTGGACATTTCTGCTGAGCATCGATTGGAAGGATCCCTGGCTT
ATTGGCCTTATTTTGGCGCATATCTTAACCACCACCACTGCGCTGCTCAG
CCGGAACAGCTCCAACTTCCAGGTTTTCCTCTTCCTAGTACTGTTGCTGG
CAGTCTACTTCACCGAAAGCATCAATGAGTTCGCTGCTAACAACTGGAGT
TCCTTTTCCAGACAACAATACTTCGATAGCAACGGCCTGTTTATCTCGAC
AGTTTTCTCAATACCTATTTTGCTTAATTGCATGCTTTTGATTGGCACTT
GGCTCTACAACTCCACGCAGCTGATGGTGACTCTAAAAACAGCGCAGCTC
AAGGAGCGAGCTCGCAAGGAACGCCAGACTAAGGCGGATTCGGAATCCAT
AGCACATAAAAAGGCAGAGGCAAGCTTTCTAGACCAT
BO23350.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:42:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30051-RC | 456 | CG30051-PC | 1..453 | 17..469 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:42:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30051-RC | 676 | CG30051-RC | 78..530 | 17..469 | 2265 | 100 | Plus |
DUBAI-RB | 4024 | CG8830-RB | 1..64 | 258..195 | 320 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:42:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12436514..12436663 | 195..344 | 750 | 100 | Plus |
2R | 25286936 | 2R | 12436719..12436844 | 344..469 | 630 | 100 | Plus |
2R | 25286936 | 2R | 12436321..12436438 | 77..194 | 590 | 100 | Plus |
2R | 25286936 | 2R | 12436197..12436256 | 17..76 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:42:08 has no hits.
BO23350.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:50 Download gff for
BO23350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30051-RC | 101..553 | 17..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:18 Download gff for
BO23350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30051-RC | 78..530 | 17..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:23:17 Download gff for
BO23350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30051-RC | 78..530 | 17..471 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:23:17 Download gff for
BO23350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12436197..12436256 | 17..76 | 100 | -> | Plus |
2R | 12436321..12436438 | 77..194 | 100 | -> | Plus |
2R | 12436514..12436662 | 195..343 | 100 | -> | Plus |
2R | 12436719..12436844 | 344..471 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:18 Download gff for
BO23350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8323826..8323943 | 77..194 | 100 | -> | Plus |
arm_2R | 8324019..8324167 | 195..343 | 100 | -> | Plus |
arm_2R | 8324224..8324349 | 344..471 | 98 | | Plus |
arm_2R | 8323702..8323761 | 17..76 | 100 | -> | Plus |
BO23350.pep Sequence
Translation from 16 to 487
> BO23350.pep
MHPGQIEVNEINGYWTFLLSIDWKDPWLIGLILAHILTTTTALLSRNSSN
FQVFLFLVLLLAVYFTESINEFAANNWSSFSRQQYFDSNGLFISTVFSIP
ILLNCMLLIGTWLYNSTQLMVTLKTAQLKERARKERQTKADSESIAHKKA
EASFLDH
BO23350.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:57:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30051-PC | 151 | CG30051-PC | 1..151 | 1..151 | 777 | 100 | Plus |