BO23353.complete Sequence
607 bp assembled on 2010-03-31
GenBank Submission: KX794232
> BO23353.complete
GAAGTTATCAGTCGACATGTTCTCAGCCAAGAGTTCTGCAATTGTGGCCG
TAGTCCTCGTCCAGATGGTGGCTCAAATCCACGGAGGAGTCTACAGCTAT
GAGGACAAGTGGGTGTACCTGGACAAGACCCTGGACCTTCCAGAGGAAGC
GATTCTCGGTGGCGTCGATCCCGATGGTTACTACACCTACGTGGGTCGTG
TCACATACAGCAGTAACATTCTGCCAGCCCGAGTGGTACCGGAGCTGGGA
AAGGCCACCTACAACACCGACACCTTGGGCAACCAAGCCACCACCTACGA
GGTTCTGGTGTCCAACGCCACTGTCGGCTACCATTGGATCCGTAGTTTCG
ATGGTTTCCGGGAAAAGAACGCCGTATCTGTGGGAACCAACGCCCTCAGC
GAGCGTGTCTTCATCTGTCGTGTCCGCTGTGATGAATCCATCTTTATCGG
CACTCTGTACCTTTCCAAGCGGATGTGCATCGTCAAGTACGACAACTTTC
CGCTCCGGCAGTTCGACAAGTACGAGATCCTTGTCCGCGAACGCCATGTA
GCTGCCGTCTCGCCATTTGTTGATGGTTATATCCACCATGCAAGCTTTCT
AGACCAT
BO23353.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:42:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16775-RB | 576 | CG16775-PB | 1..573 | 17..589 | 2865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:42:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16775-RB | 698 | CG16775-RB | 4..577 | 16..589 | 2870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:42:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17886069..17886642 | 589..16 | 2870 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:42:22 has no hits.
BO23353.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:55 Download gff for
BO23353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16775-RB | 10..577 | 22..591 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:24 Download gff for
BO23353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16775-RB | 10..577 | 22..591 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:23:22 Download gff for
BO23353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16775-RB | 10..577 | 22..591 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:23:22 Download gff for
BO23353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17886067..17886636 | 22..591 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:24 Download gff for
BO23353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17879167..17879736 | 22..591 | 99 | | Minus |
BO23353.pep Sequence
Translation from 16 to 607
> BO23353.pep
MFSAKSSAIVAVVLVQMVAQIHGGVYSYEDKWVYLDKTLDLPEEAILGGV
DPDGYYTYVGRVTYSSNILPARVVPELGKATYNTDTLGNQATTYEVLVSN
ATVGYHWIRSFDGFREKNAVSVGTNALSERVFICRVRCDESIFIGTLYLS
KRMCIVKYDNFPLRQFDKYEILVRERHVAAVSPFVDGYIHHASFLDH
BO23353.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:57:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16775-PB | 191 | CG16775-PB | 1..191 | 1..191 | 998 | 100 | Plus |
| CG5506-PA | 180 | CG5506-PA | 4..172 | 9..175 | 400 | 48.5 | Plus |
| CG44250-PC | 297 | CG44250-PC | 7..157 | 23..177 | 188 | 31.6 | Plus |
| CG44251-PA | 478 | CG44251-PA | 4..147 | 31..178 | 186 | 34.7 | Plus |
| CG44250-PB | 286 | CG44250-PB | 2..146 | 29..177 | 173 | 30.9 | Plus |
