BO23354.complete Sequence
610 bp assembled on 2010-03-31
GenBank Submission: KX795868
> BO23354.complete
GAAGTTATCAGTCGACATGGCTGAGAGCTCCAAGGGCATGGAACACACCA
CCAGCTGGTACTGCAAACTTTACAATTCCCTTAAGGAAACACCCATCGAT
GTCACCCTTTTGATCATGTCGATCGTCGTGTTCCTCAAGTTGGGATTTTT
TGCGCGTCGTCTGAGCCGCGAGGAACCAGACTTCAGTGATGATAATAATC
AGGAAGTGGATCTTCCGCCACTGCGGAAGGACTTTACGGTTCGGGAACTT
CGGGAATATGACGGCACACGGGCGGACGGTCGCATCCTAGTGGCCATCCT
TTTCAACATCTACGATGTCTCGCGATCCGTTCACTATTACGGACGAAATG
GCGTTAATCCAAACTATGCCGGTCGGGATATTTCGAGGATTTTGATCAAT
TCACCAGAGGACTTGAAGGACAGCGAGGATTTTGATGATTTGAGCGACCT
CTCACGCAACCAAATGAACACATTACGAGAGTGGGAACAGCGGTACAAGA
TGAAGTACCCATTTGTTGGAAAGCTCAAGGAGAAACTACAAATCAATGAA
GAGGAGGATTTTGAGCTGCAGCAAGCGGATCCGCTGGTGGACGCAAGCTT
TCTAGACCAT
BO23354.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:42:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16957-RB | 579 | CG16957-PB | 1..576 | 17..592 | 2880 | 100 | Plus |
| CG16957-RA | 579 | CG16957-PA | 1..576 | 17..592 | 2880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:42:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16957-RB | 778 | CG16957-RB | 84..659 | 17..592 | 2880 | 100 | Plus |
| CG16957-RA | 825 | CG16957-RA | 84..659 | 17..592 | 2880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:42:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13395526..13396101 | 592..17 | 2880 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:42:27 has no hits.
BO23354.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:57 Download gff for
BO23354.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16957-RA | 84..659 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:26 Download gff for
BO23354.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16957-RA | 84..659 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:23:23 Download gff for
BO23354.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16957-RA | 84..659 | 17..594 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:23:23 Download gff for
BO23354.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13395524..13396101 | 17..594 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:26 Download gff for
BO23354.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13395524..13396101 | 17..594 | 99 | | Minus |
BO23354.pep Sequence
Translation from 16 to 610
> BO23354.pep
MAESSKGMEHTTSWYCKLYNSLKETPIDVTLLIMSIVVFLKLGFFARRLS
REEPDFSDDNNQEVDLPPLRKDFTVRELREYDGTRADGRILVAILFNIYD
VSRSVHYYGRNGVNPNYAGRDISRILINSPEDLKDSEDFDDLSDLSRNQM
NTLREWEQRYKMKYPFVGKLKEKLQINEEEDFELQQADPLVDASFLDH
BO23354.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:57:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16957-PB | 192 | CG16957-PB | 1..192 | 1..192 | 1001 | 100 | Plus |
| CG16957-PA | 192 | CG16957-PA | 1..192 | 1..192 | 1001 | 100 | Plus |
| MSBP-PC | 248 | CG9066-PC | 41..197 | 29..183 | 305 | 41.5 | Plus |
| MSBP-PB | 248 | CG9066-PB | 41..197 | 29..183 | 305 | 41.5 | Plus |
| MSBP-PA | 248 | CG9066-PA | 41..197 | 29..183 | 305 | 41.5 | Plus |
