Clone BO23355 Report

Search the DGRC for BO23355

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptCG18193-RA
Protein status:BO23355.pep: Imported from assembly
Sequenced Size:352

Clone Sequence Records

BO23355.complete Sequence

352 bp assembled on 2010-03-31

GenBank Submission: KX798084

> BO23355.complete
GAAGTTATCAGTCGACATGCAAAGAAACTGTTTCTCTTTGCGCCCCTTCC
TTCGGGGAGTCGGTGATGTGGGTGCAGTTTGTAAGCCCATTCGTGAATTT
CGCAACTCGGCTGCTTTGAAATATGCTGCTGCTGCAGCTGCAGCTCCGAA
GACACGTCCTGGAAAAGTTCCTCCAAAAATGGTCAAATTGAGGAAGCAAT
TTCAGGCGGACAATGATTTGCCGATTTTTCTAAAAGGCGGCAGTATGGAT
AACATATTATACAGACTCACCTGGGTGCTCTGCTTCCTCGGCATAGGTGG
CGATGTATGGTTGTGGCTTGGCTATATCATTGCCGCAAGCTTTCTAGACC
AT

BO23355.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:42:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG18193-RA 321 CG18193-PA 1..318 17..334 1590 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:42:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG18193-RA 587 CG18193-RA 105..422 17..334 1590 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:42:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8343855..8344145 44..334 1455 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:42:32 has no hits.

BO23355.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:58 Download gff for BO23355.complete
Subject Subject Range Query Range Percent Splice Strand
CG18193-RA 94..411 17..336 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:28 Download gff for BO23355.complete
Subject Subject Range Query Range Percent Splice Strand
CG18193-RA 105..422 17..336 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:23:24 Download gff for BO23355.complete
Subject Subject Range Query Range Percent Splice Strand
CG18193-RA 105..422 17..336 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:23:24 Download gff for BO23355.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8343773..8343799 17..43 100 -> Plus
3R 8343855..8344145 44..336 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:28 Download gff for BO23355.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4169495..4169521 17..43 100 -> Plus
arm_3R 4169577..4169867 44..336 99   Plus

BO23355.pep Sequence

Translation from 16 to 352

> BO23355.pep
MQRNCFSLRPFLRGVGDVGAVCKPIREFRNSAALKYAAAAAAAPKTRPGK
VPPKMVKLRKQFQADNDLPIFLKGGSMDNILYRLTWVLCFLGIGGDVWLW
LGYIIAASFLDH

BO23355.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:57:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG18193-PA 106 CG18193-PA 1..106 1..106 565 100 Plus