BO23357.complete Sequence
592 bp assembled on 2010-03-31
GenBank Submission: KX798093
> BO23357.complete
GAAGTTATCAGTCGACATGGATTTGTTTAGCTCTCTGCTGCTGTGCCTGG
GAATTATTTCATTACCCAATGTGTTTACGATTTGCATTCCGCCCAATCAC
TGCATTGAAGATATGGAGGAAAGCGATGCGAAAGAGCGATTCGACTATGT
ACTTGGCAAATATGAGGAGGTGGAAATGAATATTCCCGGAAAACCAGTTG
GTTTGTATGGGAAAGTGGTTACGCATGGCGAGGCGGAGGAGCAGCACTTG
GTGTTCCAGTACATGGACAATACGCTGCATGACATCATCCAGACGTGTGC
GTTTGTGGTCAAGCGGAATCCCGGTGAGTGCGAGAACATCCGCACCTACT
GCTCGGCCTTTCTGAGCCGCCTGCCACGCCCCCTGCTGGAGCGCAAGCCC
ATCAACGTGTGTGACGATGGGACGCGAGTGGCGGAGGACGAGCCGGAAAC
GGAAGCGGAAGACAATCCGGATGCAGATGCTGAGGGGGAGACTGATCCGC
AGCAGGAGCAGGGAGTTGGTCAAGCGGAGACCACAACAGCGGAGCCGGCT
AGCTCCAAATTAAGTGAATTTTATGCAAGCTTTCTAGACCAT
BO23357.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:42:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14854-RB | 561 | CG14854-PB | 1..558 | 17..574 | 2790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:42:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14854-RB | 663 | CG14854-RB | 7..565 | 16..574 | 2795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:42:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14559264..14559637 | 574..201 | 1870 | 100 | Minus |
| 3R | 32079331 | 3R | 14559702..14559790 | 201..113 | 445 | 100 | Minus |
| 3R | 32079331 | 3R | 14559991..14560048 | 73..16 | 290 | 100 | Minus |
| 3R | 32079331 | 3R | 14559896..14559935 | 112..73 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:42:40 has no hits.
BO23357.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:29:00 Download gff for
BO23357.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14854-RB | 8..565 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:32 Download gff for
BO23357.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14854-RB | 8..565 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:23:28 Download gff for
BO23357.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14854-RB | 8..565 | 17..576 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:23:28 Download gff for
BO23357.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14559261..14559636 | 202..576 | 99 | <- | Minus |
| 3R | 14559702..14559790 | 113..201 | 100 | <- | Minus |
| 3R | 14559896..14559934 | 74..112 | 100 | <- | Minus |
| 3R | 14559991..14560047 | 17..73 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:32 Download gff for
BO23357.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10384983..10385358 | 202..576 | 99 | <- | Minus |
| arm_3R | 10385424..10385512 | 113..201 | 100 | <- | Minus |
| arm_3R | 10385618..10385656 | 74..112 | 100 | <- | Minus |
| arm_3R | 10385713..10385769 | 17..73 | 100 | | Minus |
BO23357.pep Sequence
Translation from 16 to 592
> BO23357.pep
MDLFSSLLLCLGIISLPNVFTICIPPNHCIEDMEESDAKERFDYVLGKYE
EVEMNIPGKPVGLYGKVVTHGEAEEQHLVFQYMDNTLHDIIQTCAFVVKR
NPGECENIRTYCSAFLSRLPRPLLERKPINVCDDGTRVAEDEPETEAEDN
PDADAEGETDPQQEQGVGQAETTTAEPASSKLSEFYASFLDH
BO23357.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:57:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14854-PB | 186 | CG14854-PB | 1..186 | 1..186 | 990 | 100 | Plus |
